BLASTP 2.0.6 [Sept-16-1998]
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Score E Sequences producing significant alignments: (bits) Value sp|P30971|GTH1_FUNHE GONADOTROPIN BETA-I CHAIN PRECURSOR (GTH-I... 235 1e-61 gi|2267222 (L35070) gonadotropin I beta subunit [Morone saxatilis] 139 6e-33 sp|P37205|GTH1_THUOB GONADOTROPIN BETA-I CHAIN (GTH-I) >gi|5460... 137 2e-32 pir||I50993 gonadotropin I beta subunit - Morone saxatilis >gi|... 137 2e-32 bbs|125305 gonadotropin GPI beta subunit, GPI beta, GTHI beta [... 135 1e-31 gnl|PID|d1020895 (AB003583) gonadotropin I beta subunit [Cyprin... 79 9e-15 gnl|PID|d1014224 (D88023) gonadotropin I beta subunit [Carassiu... 77 4e-14 pir||S07216 hypothetical protein - chum salmon 73 5e-13 sp|P18427|FSHB_RAT FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE-S... 72 1e-12 sp|P10257|GTH1_ONCKE GONADOTROPIN BETA-I CHAIN PRECURSOR (GTH-I... 72 1e-12 sp|P48252|GTH1_ONCMA GONADOTROPIN BETA-I CHAIN PRECURSOR (GTH-I... 71 2e-12 gi|2738515 (AF008550) follicle stimulating hormone beta subunit... 71 4e-12 sp|P04837|FSHB_BOVIN FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE... 71 4e-12 bbs|118378 follitropin beta-subunit, FSH beta-subunit [Rana cat... 70 5e-12 sp|Q60687|FSHB_MOUSE FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE... 70 6e-12 sp|P48250|GTH1_CORAU GONADOTROPIN BETA-I CHAIN PRECURSOR (GTH-I... 70 6e-12 sp|P01226|FSHB_HORSE FOLLITROPIN BETA CHAIN (FOLLICLE-STIMULATI... 69 1e-11 sp|P01225|FSHB_HUMAN FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE... 68 3e-11 pir||I46582 follicle stimulating hormone beta-subunit - pig (fr... 67 4e-11 sp|P01228|FSHB_PIG FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE-S... 67 4e-11 sp|P01227|FSHB_SHEEP FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE... 66 7e-11 sp|P80663|FSHB_STRCA FOLLITROPIN BETA CHAIN (FOLLICLE-STIMULATI... 66 9e-11 sp|P48253|GTH2_ONCMA GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-... 62 2e-09 sp|P10256|GTH2_ONCKE GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-... 61 2e-09 pir||S09344 hypothetical protein - chum salmon 61 3e-09 sp|P01235|GTHB_CYPCA GONADOTROPIN BETA CHAIN PRECURSOR >gi|2144... 61 3e-09 gnl|PID|d1014225 (D88024) gonadotropin II beta subunit [Carassi... 61 3e-09 sp|P30984|GTHB_CTEID GONADOTROPIN BETA CHAIN PRECURSOR >gi|1038... 60 5e-09 sp|P37038|GTHB_HYPMO GONADOTROPIN BETA CHAIN PRECURSOR >gi|3210... 60 5e-09 sp|P07732|GTHB_ONCTS GONADOTROPIN BETA CHAIN PRECURSOR (BETA-GT... 60 7e-09 sp|P48251|GTH2_CORAU GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-... 60 7e-09 bbs|125306 gonadotropin GPII beta subunit, GPII beta, GTHII bet... 59 9e-09 sp|P37206|GTH2_THUOB GONADOTROPIN BETA-II CHAIN (GTH-II) >gi|54... 59 2e-08 bbs|118508 gonadotropic hormone II beta subunit, GTH II-beta [C... 57 3e-08 pir||I50994 gonadotropin II beta subunit - Morone saxatilis >gi... 57 3e-08 sp|P53543|GTHB_CLAGA GONADOTROPIN BETA CHAIN PRECURSOR (GTH) >g... 57 3e-08 gnl|PID|d1020897 (AB003585) thyrotropin beta subunit [Cyprinus ... 57 6e-08 gnl|PID|d1020898 (AB003586) thyrotropin beta subunit [Ctenophar... 57 6e-08 sp|Q28376|TSHB_HORSE THYROTROPIN BETA CHAIN PRECURSOR (THYROID-... 55 1e-07 sp|P54828|TSHB_CANFA THYROTROPIN BETA CHAIN PRECURSOR (THYROID-... 55 2e-07 sp|P01223|TSHB_BOVIN THYROTROPIN BETA CHAIN PRECURSOR (THYROID-... 55 2e-07 sp|P01224|TSHB_PIG THYROTROPIN BETA CHAIN PRECURSOR (THYROID-ST... 55 2e-07 gi|207530 (M13897) thyrotropin beta subunit [Rattus norvegicus]... 54 4e-07 sp|P04652|TSHB_RAT THYROTROPIN BETA CHAIN PRECURSOR (THYROID-ST... 54 4e-07 gnl|PID|d1020896 (AB003584) thyrotropin beta subunit [Carassius... 53 5e-07 sp|P30972|GTH2_FUNHE GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-... 53 7e-07 pir||FTPGB follitropin beta chain - pig 53 7e-07 sp|P12656|TSHB_MOUSE THYROTROPIN BETA CHAIN PRECURSOR (THYROID-... 53 9e-07 pir||TTBOB thyrotropin beta chain - bovine 53 9e-07 pir||A61091 lutropin beta chain precursor - chicken 52 2e-06 sp|P45657|LSHB_COTJA LUTROPIN BETA CHAIN PRECURSOR (LUTEINIZING... 52 2e-06 sp|P79357|TSHB_LAMGL THYROTROPIN BETA CHAIN PRECURSOR (THYROID-... 52 2e-06 sp|P80071|LSHB_RANCA LUTROPIN BETA CHAIN (LUTEINIZING HORMONE) ... 52 2e-06 gi|437308 (L11722) gonadotropin beta-subunit [Acanthophagrus la... 52 2e-06 gnl|PID|d1000911 (D00578) TSH beta subunit [Rattus norvegicus] ... 52 2e-06 gnl|PID|e195691 (X90777) beta-thyrotropin [Phodopus sungorus] 52 2e-06 sp|P01222|TSHB_HUMAN THYROTROPIN BETA CHAIN PRECURSOR (THYROID-... 51 3e-06 sp|P45646|LSHB_MELGA LUTROPIN BETA CHAIN PRECURSOR (LUTEINIZING... 51 3e-06 prf||760571B thyrotropin beta [Sus scrofa domestica] 51 3e-06 sp|P80664|LSHB_STRCA LUTROPIN BETA CHAIN (LUTEINIZING HORMONE) ... 51 3e-06 pir||TTPGB thyrotropin beta chain - pig 51 3e-06 pir||I37412 beta-gonadotropin - human (fragment) >gi|640446|pdb... 50 4e-06 pir||I37231 beta-gonadotropin - human (fragment) >gi|1335012|gn... 50 4e-06 sp|P01233|CGHB_HUMAN CHORIOGONADOTROPIN BETA CHAIN PRECURSOR (C... 50 4e-06 gi|180444 (K03183) chorionic gonadotropin beta subunit [Homo sa... 50 4e-06 sp|P27767|GTH2_ANGAN GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-... 50 4e-06 sp|P12837|GTHB_MURCI GONADOTROPIN BETA CHAIN >gi|85478|pir||S07... 50 4e-06 sp|P37240|TSHB_ONCMY THYROTROPIN BETA CHAIN PRECURSOR (THYROID-... 49 1e-05 gi|3091282 (AF060566) thyrotropin beta subunit [Salmo salar] 49 1e-05 prf||1819439A gonadotropic hormone II:SUBUNIT=beta [Fundulus he... 48 2e-05 gi|2660745 (AF033495) thyrotropin beta subunit [Gallus gallus] 47 4e-05 sp|P01229|LSHB_HUMAN LUTROPIN BETA CHAIN PRECURSOR (LUTEINIZING... 47 5e-05 pir||I37994 beta-LH - human (fragment) 47 5e-05 pir||UTHUB lutropin beta chain - human 46 1e-04 sp|Q08127|TSHB_ANGAN THYROTROPIN BETA CHAIN PRECURSOR (THYROID-... 45 1e-04 prf||0511229A lutropin beta [Homo sapiens] 45 2e-04 pir||S34148 thyrotropin beta chain - European eel 45 2e-04 pir||UTSHB lutropin beta chain precursor - sheep >gi|1320 (X524... 43 8e-04 bbs|121089 (S51112) thyrotropin beta subunit, TSH beta subunit ... 43 8e-04 sp|P01231|LSHB_SHEEP LUTROPIN BETA CHAIN PRECURSOR (LUTEINIZING... 43 8e-04 sp|P08751|LSHB_HORSE LUTROPIN/CHORIOGONADOTROPIN BETA CHAIN PRE... 42 0.001 gi|163301 (M10077) luteinizing hormone beta subunit prepeptide ... 42 0.001 pir||I83048 FSH beta-subunit - rat (fragment) >gi|220740|gnl|PI... 42 0.001 pir||I46949 luteinizing hormone beta-subunit - sheep >gi|408241... 41 0.002 sp|P04651|LSHB_BOVIN LUTROPIN BETA CHAIN PRECURSOR (LUTEINIZING... 41 0.002 sp|P07434|CGHB_PAPAN CHORIOGONADOTROPIN BETA CHAIN PRECURSOR (C... 41 0.002 sp|P19794|LSHB_EQUAS LUTROPIN/CHORIOGONADOTROPIN BETA CHAIN PRE... 41 0.004 gi|2738811 (AF017450) luteinizing hormone beta-subunit [Macropu... 41 0.004 gnl|PID|e1245789 (Y16265) lutenizing hormone beta subunit [Equu... 41 0.004 gi|2738807 (AF017448) luteinizing hormone beta-subunit [Trichos... 40 0.005 sp|P01232|LSHB_PIG LUTROPIN BETA CHAIN PRECURSOR (LUTEINIZING H... 39 0.009 sp|P51500|CGHB_CALJA CHORIOGONADOTROPIN BETA CHAIN PRECURSOR (C... 38 0.019 sp|P18842|LSHB_CANFA LUTROPIN BETA CHAIN PRECURSOR (LUTEINIZING... 38 0.033 prf||720982A lutropin beta [Sus scrofa domestica] 38 0.033 gi|755761 (X02867) hTSH-beta precursor (aa 35-118) [Homo sapiens] 38 0.033 gi|3747119 (AF095716) luteinizing hormone beta subunit precurso... 37 0.043 sp|P33088|LSHB_BALAC LUTROPIN BETA CHAIN (LUTEINIZING HORMONE) ... 36 0.075 gi|2462779 (U72659) luteinizing hormone beta subunit [Ceratothe... 36 0.098 gi|3617823 (AF024520) luteinizing hormone beta subunit precurso... 36 0.098 gnl|PID|e1362229 (AJ131849) thyroid stimulating hormone beta su... 36 0.098
sp|P30971|GTH1_FUNHE GONADOTROPIN BETA-I CHAIN PRECURSOR (GTH-I) >gi|2134003|pir||I50553 gonadotropin I beta subunit - mummichog >gi|213250 (M87014) gonadotropin I beta subunit [Fundulus heteroclitus] >gi|382580|prf||1819439B gonadotropic hormone I:SUBUNIT=beta [Fundulus heteroclitus] Length = 114 Score = 235 bits (592), Expect = 1e-61 Identities = 103/114 (90%), Positives = 103/114 (90%) Query: 1 MQXXXXXXXXXXXEVGCFGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEA 60 MQ EVGCFGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEA Sbjct: 1 MQLVLMAAVLALAEVGCFGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEA 60 Query: 61 PEHRVCNGDWSYEVKHIQGCPESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 PEHRVCNGDWSYEVKHIQGCPESITYPVATNCYCSACNTKDTYCTRLYAHIPSC Sbjct: 61 PEHRVCNGDWSYEVKHIQGCPESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114
gi|2267222 (L35070) gonadotropin I beta subunit [Morone saxatilis] Length = 120 Score = 139 bits (347), Expect = 6e-33 Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 1/100 (1%) Query: 16 GC-FGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCNGDWSYEV 74 GC FGCH N+SI +E CG I+TTICEG C+ ED V+ S E PE R+CNGDWSYEV Sbjct: 18 GCSFGCHPTNISIQVESCGLTEVIYTTICEGQCYHEDLVYISHYERPEQRICNGDWSYEV 77 Query: 75 KHIQGCPESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 KHI+GCP +TYPVA NC C+ CNT++T C R IPSC Sbjct: 78 KHIKGCPVGVTYPVARNCECTTCNTENTDCGRFPEDIPSC 117
sp|P37205|GTH1_THUOB GONADOTROPIN BETA-I CHAIN (GTH-I) >gi|546063|bbs|147787 gonadotropin I beta subunit, tGTH I beta [Thunnus obesus=tuna, pituitary glands, Peptide, 102 aa] Length = 102 Score = 137 bits (342), Expect = 2e-32 Identities = 61/100 (61%), Positives = 74/100 (74%), Gaps = 4/100 (4%) Query: 16 GC-FGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCNGDWSYEV 74 GC +GCH KN+SI +E CG I TTICEG C+ ED V+ S DE ++CNGDWSYEV Sbjct: 3 GCSYGCHPKNISISVESCGITEFILTTICEGQCYLEDPVYISHDE---QKICNGDWSYEV 59 Query: 75 KHIQGCPESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 KHI+GCP +TYPVA NC C+ACNT +TYC RL ++PSC Sbjct: 60 KHIEGCPVGVTYPVARNCECTACNTGNTYCGRLPGYVPSC 99
pir||I50993 gonadotropin I beta subunit - Morone saxatilis >gi|1581991|prf||2117355B gonadotropin:SUBUNIT=beta:ISOTYPE=I [Morone saxatilis] Length = 120 Score = 137 bits (342), Expect = 2e-32 Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 1/100 (1%) Query: 16 GC-FGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCNGDWSYEV 74 GC FGCH N+SI +E CG I+TTICEG C+ ED V+ S E PE R+C GDWSYEV Sbjct: 18 GCSFGCHPTNISIQVESCGLTEVIYTTICEGQCYHEDLVYISHYERPEQRICTGDWSYEV 77 Query: 75 KHIQGCPESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 KHI+GCP +TYPVA NC C+ CNT++T C R IPSC Sbjct: 78 KHIKGCPVGVTYPVARNCECTTCNTENTACGRFPEDIPSC 117
bbs|125305 gonadotropin GPI beta subunit, GPI beta, GTHI beta [Katsuwonus plelamis=bonito, pituitary gland, Peptide, 102 aa] Length = 102 Score = 135 bits (336), Expect = 1e-31 Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 4/100 (4%) Query: 16 GC-FGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCNGDWSYEV 74 GC +GCH KNVSI +E CG I TTICEG C+ ED V+ S DE ++CNGDWSYEV Sbjct: 3 GCSYGCHPKNVSIVVESCGITEFIFTTICEGQCYLEDPVYISHDE---QKICNGDWSYEV 59 Query: 75 KHIQGCPESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 KHI+GCP +TYPVA NC C+ CNT +TYC RL + PSC Sbjct: 60 KHIEGCPVGVTYPVARNCECTVCNTGNTYCGRLPGYTPSC 99
gnl|PID|d1020895 (AB003583) gonadotropin I beta subunit [Cyprinus carpio] Length = 130 Score = 79.2 bits (192), Expect = 9e-15 Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 7/102 (6%) Query: 20 CHLKNVSIPME--RCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C L N+SI +E CG + I TT C GLC ++++V+ SP CN +W+YE Sbjct: 26 CRLTNISITVESEECGSCITIDTTACAGLCKTQESVYRSPLMLSYQNTCNFREWTYETYE 85 Query: 77 IQGCP----ESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 +GCP TYPVA +C CS CN+ T C L SC Sbjct: 86 FKGCPARADSVFTYPVALSCECSKCNSDITDCGALSQQTLSC 127
gnl|PID|d1014224 (D88023) gonadotropin I beta subunit [Carassius auratus] Length = 130 Score = 77.3 bits (187), Expect = 4e-14 Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 7/102 (6%) Query: 20 CHLKNVSIPME--RCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C L N+SI +E CG + I TT C GLC ++++V+ SP CN +W+YE Sbjct: 26 CRLTNISITVESEECGSCITIDTTACAGLCKTQESVYRSPLMLSYQNTCNFREWTYETYE 85 Query: 77 IQGCP---ESI-TYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 +GCP +SI TYPVA +C CS CN+ T C L C Sbjct: 86 FKGCPARADSIFTYPVALSCECSKCNSDITDCGVLSQQTLGC 127
pir||S07216 hypothetical protein - chum salmon Length = 113 Score = 73.4 bits (177), Expect = 5e-13 Identities = 40/101 (39%), Positives = 53/101 (51%), Gaps = 4/101 (3%) Query: 18 FGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 +GC L N++I +ER I T C GLC + D +ES VCN +WSYE + Sbjct: 6 YGCRLNNMTIIVEREDCHGSITITTCAGLCETTDLNYESTWLPRSQGVCNFKEWSYEKVY 65 Query: 77 IQGCP---ESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 ++GCP E PVA +C C C T +T C R+ PSC Sbjct: 66 LEGCPSGVEPFFIPVAKSCDCIKCKTDNTDCDRISMATPSC 106
sp|P18427|FSHB_RAT FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE-STIMULATING HORMONE) (FSH-B) >gi|111631|pir||A32893 follitropin beta chain precursor - rat >gi|204181 (M27048) follicle-stimulating hormone beta-subunit [Rattus norvegicus] Length = 130 Score = 72.2 bits (174), Expect = 1e-12 Identities = 37/98 (37%), Positives = 52/98 (52%), Gaps = 7/98 (7%) Query: 15 VGCFGCHLKNVSIPMERCGQRVCI--HTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWS 71 V C C L N++I +E+ R CI +TT CEG C++ D V++ P +VC + Sbjct: 17 VCCHSCELTNITISVEKEECRFCISINTTWCEGYCYTRDLVYKDPARPNTQKVCTFKELV 76 Query: 72 YEVKHIQGCPES----ITYPVATNCYCSACNTKDTYCT 105 YE + GC TYPVAT C+C C++ T CT Sbjct: 77 YETIRLPGCARHSDSLYTYPVATECHCGKCDSDSTDCT 114
sp|P10257|GTH1_ONCKE GONADOTROPIN BETA-I CHAIN PRECURSOR (GTH-I) >gi|103859|pir||B36179 gonadotropin I beta chain precursor - chum salmon >gi|213428 (M27153) gonadotropin-I beta subunit precursor [Oncorhynchus keta] Length = 137 Score = 72.2 bits (174), Expect = 1e-12 Identities = 39/101 (38%), Positives = 53/101 (51%), Gaps = 4/101 (3%) Query: 18 FGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 +GC L N++I +ER I T C GLC + D ++S VCN +WSYE + Sbjct: 30 YGCRLNNMTIIVEREDCHGSITITTCAGLCETTDLNYQSTWLPRSQGVCNFKEWSYEKVY 89 Query: 77 IQGCP---ESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 ++GCP E PVA +C C C T +T C R+ PSC Sbjct: 90 LEGCPSGVEPFFIPVAKSCDCIKCKTDNTDCDRISMATPSC 130
sp|P48252|GTH1_ONCMA GONADOTROPIN BETA-I CHAIN PRECURSOR (GTH-I) >gi|2133954|pir||I51231 gonadotrophin I beta subunit - cherry salmon >gi|546262|bbs|145468 (S69275) gonadotrophin I beta subunit, GTH-I beta [Oncorhynchus masou=masu salmon, pituitary glands, Peptide, 137 aa] [Oncorhynchus masou] Length = 137 Score = 71.4 bits (172), Expect = 2e-12 Identities = 39/101 (38%), Positives = 52/101 (50%), Gaps = 4/101 (3%) Query: 18 FGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 +GC L N++I +ER I T C GLC + D ++S VCN +WSYE + Sbjct: 30 YGCRLNNMTITVEREDCHGSITITTCAGLCETTDLNYQSTWLPRSQGVCNFKEWSYEKVY 89 Query: 77 IQGCP---ESITYPVATNCYCSACNTKDTYCTRLYAHIPSC 114 ++GCP E PVA +C C C T +T C R PSC Sbjct: 90 LEGCPSGVEPFFIPVAKSCDCIKCKTDNTDCDRKSMATPSC 130
gi|2738515 (AF008550) follicle stimulating hormone beta subunit [Trichosurus vulpecula] Length = 129 Score = 70.6 bits (170), Expect = 4e-12 Identities = 35/98 (35%), Positives = 54/98 (54%), Gaps = 7/98 (7%) Query: 15 VGCFGCHLKNVSIPMER--CGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWS 71 + C GC L N++I +ER C + I+TT C G C + D V++ P + C ++ Sbjct: 16 IWCNGCMLTNITISVEREECEFCISINTTWCSGYCHTRDLVYKDPIRPNVQKTCTFKEFV 75 Query: 72 YEVKHIQGCPESI----TYPVATNCYCSACNTKDTYCT 105 YE ++ GC + +YPVAT C+C +C+T T CT Sbjct: 76 YETVNLPGCAKQADSLYSYPVATACHCGSCDTDSTDCT 113
sp|P04837|FSHB_BOVIN FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE-STIMULATING HORMONE) (FSH-B) >gi|89564|pir||A23550 follitropin beta chain precursor - bovine >gi|163060 (M13383) prefollicle stimulating hormone beta chain [Bos taurus] >gi|163062 (M14853) follicle stimulating hormone beta-subunit precursor [Bos taurus] >gi|163064 (M83753) follicle stimulating hormone beta-subunit [Bos taurus] Length = 129 Score = 70.6 bits (170), Expect = 4e-12 Identities = 35/96 (36%), Positives = 50/96 (51%), Gaps = 7/96 (7%) Query: 17 CFGCHLKNVSIPMER--CGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYE 73 C C L N++I +E+ CG + I+TT C G C++ D V+ P + C + YE Sbjct: 18 CRSCELTNITITVEKEECGFCISINTTWCAGYCYTRDLVYRDPARPNIQKTCTFKELVYE 77 Query: 74 VKHIQGCPES----ITYPVATNCYCSACNTKDTYCT 105 + GC TYPVAT C+CS C++ T CT Sbjct: 78 TVKVPGCAHHADSLYTYPVATECHCSKCDSDSTDCT 113
bbs|118378 follitropin beta-subunit, FSH beta-subunit [Rana catesbeiana=bullfrogs, Peptide, 107 aa] Length = 107 Score = 70.2 bits (169), Expect = 5e-12 Identities = 34/93 (36%), Positives = 54/93 (57%), Gaps = 7/93 (7%) Query: 20 CHLKNVSIPMER--CGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C L N++I +E+ CG V ++ T C G C+++DA P ++ + VC + YE Sbjct: 1 CELSNITIVLEKEECGACVSVNATWCSGYCYTKDANLMYPQKSEKQGVCTYTEVIYETVK 60 Query: 77 IQGCPESI----TYPVATNCYCSACNTKDTYCT 105 I GC E++ TYPVA +C+C C+++ T CT Sbjct: 61 IPGCAENVNPFYTYPVAVDCHCGRCDSETTDCT 93
sp|Q60687|FSHB_MOUSE FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE-STIMULATING HORMONE) (FSH-B) >gi|2137296|pir||JC4526 follitropin beta chain - mouse >gi|595516 (U12932) FSH beta subunit [Mus musculus] Length = 130 Score = 69.9 bits (168), Expect = 6e-12 Identities = 35/96 (36%), Positives = 50/96 (51%), Gaps = 7/96 (7%) Query: 17 CFGCHLKNVSIPMERCGQRVCI--HTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYE 73 C C L N++I +E+ R CI +TT C G C++ D V++ P +VC + YE Sbjct: 19 CHSCELTNITISVEKEECRFCISINTTWCAGYCYTRDLVYKDPARPNTQKVCTFKELVYE 78 Query: 74 VKHIQGCPES----ITYPVATNCYCSACNTKDTYCT 105 + GC TYPVAT C+C C++ T CT Sbjct: 79 TVRLPGCARHSDSLYTYPVATECHCGKCDSDSTDCT 114
sp|P48250|GTH1_CORAU GONADOTROPIN BETA-I CHAIN PRECURSOR (GTH-I) >gi|479525|pir||S34349 gonadotropin I beta chain - arctic cisco >gi|2133943|pir||I50144 gonadotropin I beta chain - arctic cisco >gi|858749 (L23432) gonadotropin I beta subunit [Coregonus autumnalis] Length = 137 Score = 69.9 bits (168), Expect = 6e-12 Identities = 37/101 (36%), Positives = 51/101 (49%), Gaps = 4/101 (3%) Query: 18 FGCHLKNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 +GC L N++I +ER I T C GLC + D ++S CN +WSYE + Sbjct: 30 YGCRLNNMTITVEREDCHGSITITTCAGLCETTDLNYQSTWLPRSQGACNFKEWSYEEVY 89 Query: 77 IQGCPESIT---YPVATNCYCSACNTKDTYCTRLYAHIPSC 114 ++GCP PVA +C C C T +T C R+ PSC Sbjct: 90 LEGCPPGANPFFIPVAKSCDCIKCKTDNTDCDRISMATPSC 130
sp|P01226|FSHB_HORSE FOLLITROPIN BETA CHAIN (FOLLICLE-STIMULATING HORMONE) (FSH-B) >gi|69174|pir||FTHOB follitropin beta chain - horse Length = 118 Score = 68.7 bits (165), Expect = 1e-11 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 7/93 (7%) Query: 20 CHLKNVSIPMERCGQRVCI--HTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C L N++I +E+ G R CI +TT C G C++ D V++ P + C + YE Sbjct: 3 CZLTNITIAVEKEGCRFCITINTTWCAGYCYTRDLVYKDPARPKIQKTCTFKELVYETVK 62 Query: 77 IQGCPESI----TYPVATNCYCSACNTKDTYCT 105 + GC TYPVAT C+C C++ T CT Sbjct: 63 VPGCAHHADSLYTYPVATZCHCGKCBSDSTBCT 95
sp|P01225|FSHB_HUMAN FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE-STIMULATING HORMONE) (FSH-B) >gi|476441|pir||FTHUB follitropin beta chain precursor - human >gi|182762 (M16647) follicle-stimulating hormone [Homo sapiens] >gi|182767 (M54914) follicle-stimulating hormone beta-subunit [Homo sapiens] >gi|511854 (M24541) follicle stimulating hormone beta-subunit [Homo sapiens] Length = 129 Score = 67.5 bits (162), Expect = 3e-11 Identities = 34/96 (35%), Positives = 49/96 (50%), Gaps = 7/96 (7%) Query: 17 CFGCHLKNVSIPMERCGQRVCI--HTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYE 73 C C L N++I +E+ R CI +TT C G C++ D V++ P + C + YE Sbjct: 18 CNSCELTNITIAIEKEECRFCISINTTWCAGYCYTRDLVYKDPARPKIQKTCTFKELVYE 77 Query: 74 VKHIQGCPESI----TYPVATNCYCSACNTKDTYCT 105 + GC TYPVAT C+C C++ T CT Sbjct: 78 TVRVPGCAHHADSLYTYPVATQCHCGKCDSDSTDCT 113
pir||I46582 follicle stimulating hormone beta-subunit - pig (fragment) >gi|164464 (M35676) follicle stimulating hormone beta-subunit [Sus scrofa] Length = 115 Score = 67.1 bits (161), Expect = 4e-11 Identities = 33/96 (34%), Positives = 49/96 (50%), Gaps = 7/96 (7%) Query: 17 CFGCHLKNVSIPMER--CGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYE 73 C C L N++I +E+ C + I+TT C G C++ D V++ P + C + YE Sbjct: 4 CNSCELTNITITVEKEECNFCISINTTWCAGYCYTRDLVYKDPARPNIQKTCTFKELVYE 63 Query: 74 VKHIQGCPESI----TYPVATNCYCSACNTKDTYCT 105 + GC TYPVAT C+C C++ T CT Sbjct: 64 TVKVPGCAHHADSLYTYPVATECHCGKCDSDSTDCT 99
sp|P01228|FSHB_PIG FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE-STIMULATING HORMONE) (FSH-B) >gi|482506|pir||A48169 follitropin beta chain precursor - pig >gi|217688|gnl|PID|d1000954 (D00621) follicle stimulation hormone beta subunit [Sus scrofa] Length = 129 Score = 67.1 bits (161), Expect = 4e-11 Identities = 33/96 (34%), Positives = 49/96 (50%), Gaps = 7/96 (7%) Query: 17 CFGCHLKNVSIPMER--CGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYE 73 C C L N++I +E+ C + I+TT C G C++ D V++ P + C + YE Sbjct: 18 CNSCELTNITITVEKEECNFCISINTTWCAGYCYTRDLVYKDPARPNIQKTCTFKELVYE 77 Query: 74 VKHIQGCPESI----TYPVATNCYCSACNTKDTYCT 105 + GC TYPVAT C+C C++ T CT Sbjct: 78 TVKVPGCAHHADSLYTYPVATECHCGKCDSDSTDCT 113
sp|P01227|FSHB_SHEEP FOLLITROPIN BETA CHAIN PRECURSOR (FOLLICLE-STIMULATING HORMONE) (FSH-B) >gi|2144638|pir||FTSHB follitropin beta chain precursor - sheep >gi|238865|bbs|64746 (S64745) FSH-beta, follicle-stimulating hormone beta [sheep, Peptide, 129 aa] [Ovis aries] >gi|683658 (X15493) FSH [Ovis aries] Length = 129 Score = 66.3 bits (159), Expect = 7e-11 Identities = 33/96 (34%), Positives = 48/96 (49%), Gaps = 7/96 (7%) Query: 17 CFGCHLKNVSIPMER--CGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYE 73 C C L N++I +E+ C + I+TT C G C++ D V++ P + C + YE Sbjct: 18 CRSCELTNITITVEKEECSFCISINTTWCAGYCYTRDLVYKDPARPNIQKACTFKELVYE 77 Query: 74 VKHIQGCPES----ITYPVATNCYCSACNTKDTYCT 105 + GC TYPVAT C+C C+ T CT Sbjct: 78 TVKVPGCAHHADSLYTYPVATECHCGKCDRDSTDCT 113
sp|P80663|FSHB_STRCA FOLLITROPIN BETA CHAIN (FOLLICLE-STIMULATING HORMONE) (FSH-B) Length = 106 Score = 66.0 bits (158), Expect = 9e-11 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 7/93 (7%) Query: 20 CHLKNVSIPMER--CGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C L N++I +ER C + ++ T C G CF+ D V++ P + + C + YE Sbjct: 1 CELTNITIAVEREECELCITVNATWCSGYCFTRDPVYKYPPVSEVQQTCTFKEVVYETVK 60 Query: 77 IQGC---PESI-TYPVATNCYCSACNTKDTYCT 105 I GC ES+ +YPVAT C+C C+T T CT Sbjct: 61 IPGCRDHAESLYSYPVATECHCETCDTDSTDCT 93
sp|P48253|GTH2_ONCMA GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-II) >gi|2133955|pir||I51232 gonadotrophin II beta subunit - cherry salmon >gi|546264|bbs|145474 (S69276) gonadotrophin II beta subunit, GTH-II beta [Oncorhynchus masou=masu salmon, pituitary glands, Peptide, 142 aa] [Oncorhynchus masou] Length = 142 Score = 61.7 bits (147), Expect = 2e-09 Identities = 33/88 (37%), Positives = 44/88 (49%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGCP 81 + VS+ E C + I T IC G C +++ VF SP VC D YE+ + CP Sbjct: 34 QTVSLEKEGCPTCLVIQTPICSGHCITKEPVFRSPFSTVYQHVCTYRDVRYEMIRLPDCP 93 Query: 82 ----ESITYPVATNCYCSACNTKDTYCT 105 +TYPVA +C CS CN + CT Sbjct: 94 PWVDPHVTYPVALSCDCSLCNMDTSDCT 121
sp|P10256|GTH2_ONCKE GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-II) >gi|103860|pir||C36179 gonadotropin II beta chain precursor - chum salmon >gi|213430 (M27154) gonadotropin-II beta subunit precursor [Oncorhynchus keta] Length = 142 Score = 61.3 bits (146), Expect = 2e-09 Identities = 33/88 (37%), Positives = 44/88 (49%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGCP 81 + VS+ E C + I T IC G C +++ VF+SP VC D YE + CP Sbjct: 34 QTVSLEKEGCPTCLVIQTPICSGHCVTKEPVFKSPFSTVYQHVCTYRDVRYETIRLPDCP 93 Query: 82 ----ESITYPVATNCYCSACNTKDTYCT 105 +TYPVA +C CS CN + CT Sbjct: 94 PWVDPHVTYPVALSCDCSLCNMDTSDCT 121
pir||S09344 hypothetical protein - chum salmon Length = 119 Score = 60.9 bits (145), Expect = 3e-09 Identities = 33/88 (37%), Positives = 44/88 (49%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGCP 81 + VS+ E C + I T IC G C +++ VF+SP VC D YE + CP Sbjct: 11 QTVSLEKEGCPTCLVIQTPICSGHCVTKEPVFKSPFSTVIQHVCTYRDVRYETIRLPDCP 70 Query: 82 ----ESITYPVATNCYCSACNTKDTYCT 105 +TYPVA +C CS CN + CT Sbjct: 71 PWVDPHVTYPVALSCDCSLCNMDTSDCT 98
sp|P01235|GTHB_CYPCA GONADOTROPIN BETA CHAIN PRECURSOR >gi|2144640|pir||UTCAB gonadotropin beta chain precursor - common carp >gi|62620 (X59888) gonadotropin beta subunit 1 precursor [Cyprinus carpio] >gi|62622 (X59889) gonadotropin beta subunit 2 [Cyprinus carpio] Length = 144 Score = 60.9 bits (145), Expect = 3e-09 Identities = 31/88 (35%), Positives = 45/88 (50%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGCP 81 + V++ E C + + + TTIC G C +++ V++SP VC D YE + CP Sbjct: 38 ETVAVEKEGCPKCLVLQTTICSGHCLTKEPVYKSPFSTVYQHVCTYRDVRYETVRLPDCP 97 Query: 82 ES----ITYPVATNCYCSACNTKDTYCT 105 ITYPVA +C CS C + CT Sbjct: 98 PGVDPHITYPVALSCDCSLCTMDTSDCT 125
gnl|PID|d1014225 (D88024) gonadotropin II beta subunit [Carassius auratus] Length = 140 Score = 60.9 bits (145), Expect = 3e-09 Identities = 31/88 (35%), Positives = 45/88 (50%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGCP 81 + V++ E C + + + TTIC G C +++ V++SP VC D YE + CP Sbjct: 34 ETVAVEKEGCPKCLVLQTTICSGHCLTKEPVYKSPFSTVYQHVCTYRDVRYETVRLPDCP 93 Query: 82 ES----ITYPVATNCYCSACNTKDTYCT 105 ITYPVA +C CS C + CT Sbjct: 94 PGVDPHITYPVALSCDCSLCTMDTSDCT 121
sp|P30984|GTHB_CTEID GONADOTROPIN BETA CHAIN PRECURSOR >gi|103825|pir||S16763 gonadotropin beta chain - grass carp >gi|62709 (X61051) beta subunit of grass carp gonadotrophin [Ctenopharyngodon idella] Length = 146 Score = 60.1 bits (143), Expect = 5e-09 Identities = 31/88 (35%), Positives = 44/88 (49%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGCP 81 + V++ E C + + TTIC G C +++ V++SP VC D YE + CP Sbjct: 40 ETVAVEKEGCPKCLVFQTTICSGHCLTKEPVYKSPFSTVYQHVCTYRDVRYETVRLPDCP 99 Query: 82 ES----ITYPVATNCYCSACNTKDTYCT 105 ITYPVA +C CS C + CT Sbjct: 100 PGVDPHITYPVALSCDCSLCTMDTSDCT 127
sp|P37038|GTHB_HYPMO GONADOTROPIN BETA CHAIN PRECURSOR >gi|321068|pir||B60626 gonadotropin beta chain precursor - silver carp Length = 141 Score = 60.1 bits (143), Expect = 5e-09 Identities = 31/88 (35%), Positives = 44/88 (49%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGCP 81 + V++ E C + + TTIC G C +++ V++SP VC D YE + CP Sbjct: 35 ETVAVEKEGCPKCLVFQTTICSGHCLTKEPVYKSPFSTVYQHVCTYRDVRYETVRLPDCP 94 Query: 82 ES----ITYPVATNCYCSACNTKDTYCT 105 ITYPVA +C CS C + CT Sbjct: 95 PGVDPHITYPVALSCDCSLCTMDTSDCT 122
sp|P07732|GTHB_ONCTS GONADOTROPIN BETA CHAIN PRECURSOR (BETA-GTH) >gi|85551|pir||A25800 gonadotropin beta chain precursor - chinook salmon >gi|64203 (X04404) precursor polypeptide [Oncorhynchus tschawytscha] Length = 142 Score = 59.7 bits (142), Expect = 7e-09 Identities = 32/88 (36%), Positives = 44/88 (49%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGCP 81 + VS+ E C + I IC G C +++ VF+SP VC D YE+ + CP Sbjct: 34 QTVSLEKEGCPTCLVIRAPICSGHCVTKEPVFKSPFSTVYQHVCTYRDVRYEMIRLPDCP 93 Query: 82 ----ESITYPVATNCYCSACNTKDTYCT 105 +TYPVA +C CS CN + CT Sbjct: 94 PWSDPHVTYPVALSCDCSLCNMDTSDCT 121
sp|P48251|GTH2_CORAU GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-II) >gi|2133944|pir||I50143 gonadotropin II beta chain - arctic cisco >gi|387921 (L23431) gonadotropin II beta subunit [Coregonus autumnalis] Length = 142 Score = 59.7 bits (142), Expect = 7e-09 Identities = 33/88 (37%), Positives = 44/88 (49%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGC- 80 + VS+ E C + I T IC G CF+++ VF+SP VC D YE + C Sbjct: 35 QTVSLEKEGCPTCLVIQTPICSGHCFTKELVFKSPFSTVYQHVCTYRDVRYETICLPDCS 94 Query: 81 ---PESITYPVATNCYCSACNTKDTYCT 105 +TYPVA +C CS CN + CT Sbjct: 95 PWVDPHVTYPVALSCDCSLCNMDTSDCT 122
bbs|125306 gonadotropin GPII beta subunit, GPII beta, GTHII beta [Katsuwonus plelamis=bonito, pituitary gland, Peptide, 115 aa] Length = 115 Score = 59.3 bits (141), Expect = 9e-09 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 7/93 (7%) Query: 20 CHLKNVSIPMERCGQRVC--IHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C L N ++ +E+ G C + TTIC G C ++D V + P VC D+ Y+ Sbjct: 6 CQLINQTVSVEKEGCATCHPVETTICSGHCITKDPVIKIPFSKVYQHVCTYRDFYYKTFE 65 Query: 77 IQGCP----ESITYPVATNCYCSACNTKDTYCT 105 + CP ++TYPVA +C+C C + CT Sbjct: 66 LPDCPPGVDPTVTYPVALSCHCGRCAMDTSDCT 98
sp|P37206|GTH2_THUOB GONADOTROPIN BETA-II CHAIN (GTH-II) >gi|546064|bbs|147788 gonadotropin II beta subunit, tGTH II beta [Thunnus obesus=tuna, pituitary glands, Peptide, 115 aa] Length = 115 Score = 58.6 bits (139), Expect = 2e-08 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 7/93 (7%) Query: 20 CHLKNVSIPMERCGQRVC--IHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C L N ++ +E+ G C + TTIC G C ++D V + P VC D+ Y+ Sbjct: 6 CQLINQTVSVEKEGCASCHPVETTICSGHCITKDPVIKIPFSKVYQHVCTYRDFYYKTFE 65 Query: 77 IQGCP----ESITYPVATNCYCSACNTKDTYCT 105 + CP ++TYPVA +C+C C + CT Sbjct: 66 LPDCPPGVDPTVTYPVALSCHCGRCAMDTSDCT 98
bbs|118508 gonadotropic hormone II beta subunit, GTH II-beta [Clarias gariepinus=African catfish, pituitary glands, Peptide, 117 aa] Length = 117 Score = 57.4 bits (136), Expect = 3e-08 Identities = 29/88 (32%), Positives = 45/88 (50%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGC- 80 + VS+ + C + + T+IC G CF+++ V++SP + VC D YE + C Sbjct: 11 ETVSVEKDGCPKCLAFQTSICSGHCFTKEPVYKSPFSSIYQHVCTYRDVRYETIRLPDCR 70 Query: 81 ---PESITYPVATNCYCSACNTKDTYCT 105 +TYPVA +C CS C + CT Sbjct: 71 PGVDPHVTYPVALSCECSLCTMDTSDCT 98
pir||I50994 gonadotropin II beta subunit - Morone saxatilis >gi|598255 (L35096) gonadotropin II beta subunit [Morone saxatilis] >gi|1581990|prf||2117355A gonadotropin:SUBUNIT=beta:ISOTYPE=II [Morone saxatilis] Length = 147 Score = 57.4 bits (136), Expect = 3e-08 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 7/93 (7%) Query: 20 CHLKNVSIPMERCGQRVC--IHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C L N ++ +E+ G C + TTIC G C ++D V + P VC D Y+ Sbjct: 38 CQLINQTVSLEKEGCPKCHPVETTICSGHCITKDPVIKIPFSNVYQHVCTYRDLHYKTFE 97 Query: 77 IQGCP----ESITYPVATNCYCSACNTKDTYCT 105 + CP ++TYPVA +C+C C + CT Sbjct: 98 LPDCPPGVDPTVTYPVAQSCHCGRCAMDTSDCT 130
sp|P53543|GTHB_CLAGA GONADOTROPIN BETA CHAIN PRECURSOR (GTH) >gi|1321782|gnl|PID|e242673 (X97761) gonadotropin beta-subunit [Clarias gariepinus] Length = 138 Score = 57.4 bits (136), Expect = 3e-08 Identities = 29/88 (32%), Positives = 45/88 (50%), Gaps = 5/88 (5%) Query: 23 KNVSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKHIQGC- 80 + VS+ + C + + T+IC G CF+++ V++SP + VC D YE + C Sbjct: 32 ETVSVEKDGCPKCLAFQTSICSGHCFTKEPVYKSPFSSIYQHVCTYRDVRYETIRLPDCR 91 Query: 81 ---PESITYPVATNCYCSACNTKDTYCT 105 +TYPVA +C CS C + CT Sbjct: 92 PGVDPHVTYPVALSCECSLCTMDTSDCT 119
gnl|PID|d1020897 (AB003585) thyrotropin beta subunit [Cyprinus carpio] Length = 150 Score = 56.6 bits (134), Expect = 6e-08 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 9/88 (10%) Query: 25 VSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCNGDWSYEVKH----IQGC 80 + I + C V ++TTIC G CFS D+ + P V G EV++ + GC Sbjct: 28 IYIERQECNYCVAVNTTICMGFCFSRDSNVKEL-VGPRFLVQRGCTYQEVEYRTAILPGC 86 Query: 81 PES----ITYPVATNCYCSACNTKDTYC 104 P TYPVA +C+CS CNT C Sbjct: 87 PSHADPHFTYPVALSCHCSTCNTHSDEC 114
gnl|PID|d1020898 (AB003586) thyrotropin beta subunit [Ctenopharyngodon idella] Length = 147 Score = 56.6 bits (134), Expect = 6e-08 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 9/88 (10%) Query: 25 VSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCNGDWSYEVKH----IQGC 80 + I + C V ++TTIC G CFS D+ + P V G EV++ + GC Sbjct: 25 IYIERQECNYCVAVNTTICMGFCFSRDSNVKEL-VGPRFLVQRGCTYQEVEYRTAILPGC 83 Query: 81 PE----SITYPVATNCYCSACNTKDTYC 104 P TYPVA +C+CS CNT C Sbjct: 84 PSYADPHFTYPVALSCHCSTCNTHSDEC 111
sp|Q28376|TSHB_HORSE THYROTROPIN BETA CHAIN PRECURSOR (THYROID-STIMULATING HORMONE) (TSH-B) >gi|1262916 (U51789) thyrotropin beta chain [Equus caballus] Length = 138 Score = 55.4 bits (131), Expect = 1e-07 Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 17/97 (17%) Query: 27 IPMERCGQRVCIHTTICEGLCFSED--AVFESPDEAPEHRVCN-GDWSYEVKHIQGCPES 83 + + C + I+TTIC G C + D P A VC D+ Y+ I GCP+ Sbjct: 31 VERKECAYCLTINTTICAGYCMTRDINGKLFLPKYALSQDVCTYRDFMYKTVEIPGCPDH 90 Query: 84 IT----YPVATNCYCSACNT----------KDTYCTR 106 +T YPVA +C C CNT K YCT+ Sbjct: 91 VTPYFSYPVAVSCKCGKCNTDYSDCIHEAIKANYCTK 127
sp|P54828|TSHB_CANFA THYROTROPIN BETA CHAIN PRECURSOR (THYROID-STIMULATING HORMONE) (TSH-B) >gi|1263293 (U51644) thyrotropin beta chain [Canis familiaris] Length = 138 Score = 55.0 bits (130), Expect = 2e-07 Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 17/97 (17%) Query: 27 IPMERCGQRVCIHTTICEGLCFSED--AVFESPDEAPEHRVCN-GDWSYEVKHIQGCPES 83 + + C + I+TTIC G C + D P A VC D+ Y+ I GCP Sbjct: 31 VERKECAYCLTINTTICAGYCMTRDINGKLFLPKYALSQDVCTYRDFMYKTVEIPGCPRH 90 Query: 84 IT----YPVATNCYCSACNT----------KDTYCTR 106 +T YPVA +C C CNT K YCT+ Sbjct: 91 VTPYFSYPVAVSCKCGKCNTDYSDCIHEAIKTNYCTK 127
sp|P01223|TSHB_BOVIN THYROTROPIN BETA CHAIN PRECURSOR (THYROID-STIMULATING HORMONE) (TSH-B) >gi|2136822|pir||I45985 thyrotropin subunit beta prepeptide - bovine >gi|163793 (K01939) thyrotropin subunit beta prepeptide [Bos taurus] Length = 138 Score = 54.7 bits (129), Expect = 2e-07 Identities = 32/97 (32%), Positives = 44/97 (44%), Gaps = 17/97 (17%) Query: 27 IPMERCGQRVCIHTTICEGLCFSEDAVFES--PDEAPEHRVCN-GDWSYEVKHIQGCPES 83 + + C + I+TT+C G C + D + P A VC D+ Y+ I GCP Sbjct: 31 VERKECAYCLTINTTVCAGYCMTRDVNGKLFLPKYALSQDVCTYRDFMYKTAEIPGCPRH 90 Query: 84 IT----YPVATNCYCSACNT----------KDTYCTR 106 +T YPVA +C C CNT K YCT+ Sbjct: 91 VTPYFSYPVAISCKCGKCNTDYSDCIHEAIKTNYCTK 127
sp|P01224|TSHB_PIG THYROTROPIN BETA CHAIN PRECURSOR (THYROID-STIMULATING HORMONE) (TSH-B) >gi|89302|pir||B30339 thyrotropin beta chain precursor - pig >gi|1055040 (U39816) thyrotropin beta subunit precursor [Sus scrofa] >gi|226400|prf||1510300B glycoprotein hormone beta [Sus scrofa domestica] Length = 138 Score = 54.7 bits (129), Expect = 2e-07 Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 17/97 (17%) Query: 27 IPMERCGQRVCIHTTICEGLCFSED--AVFESPDEAPEHRVCN-GDWSYEVKHIQGCPES 83 + + C + I+TTIC G C + D P A VC D+ Y+ I GCP Sbjct: 31 VERKECAYCLTINTTICAGYCMTRDFNGKLFLPKYALSQDVCTYRDFMYKTVEIPGCPHH 90 Query: 84 IT----YPVATNCYCSACNT----------KDTYCTR 106 +T YPVA +C C CNT K YCT+ Sbjct: 91 VTPYFSYPVAISCKCGKCNTDYSDCIHEAIKTNYCTK 127
gi|207530 (M13897) thyrotropin beta subunit [Rattus norvegicus] >gi|207534 (M14450) thyrotropin beta subunit [Rattus norvegicus] >gi|207536 (M10902) thyrotropin-beta-subunit precursor [Rattus norvegicus] Length = 138 Score = 53.9 bits (127), Expect = 4e-07 Identities = 30/86 (34%), Positives = 40/86 (45%), Gaps = 7/86 (8%) Query: 27 IPMERCGQRVCIHTTICEGLCFSED--AVFESPDEAPEHRVCN-GDWSYEVKHIQGCPES 83 + C + I+TTIC G C + D P A VC D++Y I GCP Sbjct: 31 VDRRECAYCLTINTTICAGYCMTRDINGKLFLPKYALSQDVCTYRDFTYRTVEIPGCPHH 90 Query: 84 I----TYPVATNCYCSACNTKDTYCT 105 + +YPVA +C C CNT + CT Sbjct: 91 VAPYFSYPVALSCKCGKCNTDYSDCT 116
sp|P04652|TSHB_RAT THYROTROPIN BETA CHAIN PRECURSOR (THYROID-STIMULATING HORMONE) (TSH-B) >gi|69172|pir||TTRTB thyrotropin beta chain precursor - rat >gi|57417 (X01454) TSH-beta precursor [Rattus norvegicus] Length = 138 Score = 53.9 bits (127), Expect = 4e-07 Identities = 30/86 (34%), Positives = 40/86 (45%), Gaps = 7/86 (8%) Query: 27 IPMERCGQRVCIHTTICEGLCFSED--AVFESPDEAPEHRVCN-GDWSYEVKHIQGCPES 83 + C + I+TTIC G C + D P A VC D++Y I GCP Sbjct: 31 VDRRECAYCLTINTTICAGYCMTRDINGKLFLPKYALSQDVCTYRDFTYRTVEIPGCPHH 90 Query: 84 I----TYPVATNCYCSACNTKDTYCT 105 + +YPVA +C C CNT + CT Sbjct: 91 VAPYFSYPVALSCKCGKCNTDYSDCT 116
gnl|PID|d1020896 (AB003584) thyrotropin beta subunit [Carassius auratus] Length = 150 Score = 53.5 bits (126), Expect = 5e-07 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 9/88 (10%) Query: 25 VSIPMERCGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCNGDWSYEVKH----IQGC 80 + I + C V ++TTIC G CFS D+ + A V G +EV++ + GC Sbjct: 28 IYIERQECNYCVAVNTTICMGFCFSRDSNVKELVGA-RFLVQRGCTYHEVEYRMAILPGC 86 Query: 81 PES----ITYPVATNCYCSACNTKDTYC 104 P YPVA +C+CS CNT C Sbjct: 87 PSHADPHFIYPVALSCHCSTCNTNSDEC 114
sp|P30972|GTH2_FUNHE GONADOTROPIN BETA-II CHAIN PRECURSOR (GTH-II) >gi|2134004|pir||I50554 gonadotropin II beta subunit - mummichog >gi|213252 (M87015) gonadotropin II beta subunit [Fundulus heteroclitus] Length = 136 Score = 53.1 bits (125), Expect = 7e-07 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 7/93 (7%) Query: 20 CHLKNVSIPMERCGQRVC--IHTTICEGLCFSEDAVFE-SPDEAPEHRVCNGDWSYEV-- 74 C L N +I +E+ G C + TTIC G C ++D ++ S ++A +H GD Y+ Sbjct: 27 CQLLNQTISLEKRGCSGCHRVETTICSGYCATKDPNYKTSYNKAIQHVCTYGDLYYKTFE 86 Query: 75 --KHIQGCPESITYPVATNCYCSACNTKDTYCT 105 + + G +TYPVA +C C C + CT Sbjct: 87 FPECVPGVDPVVTYPVALSCRCGGCAMATSDCT 119
pir||FTPGB follitropin beta chain - pig Length = 107 Score = 53.1 bits (125), Expect = 7e-07 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%) Query: 20 CHLKNVSIPMERCGQRVCI--HTTICEGLCFS-EDAVFESPDEAPEHRVCN-GDWSYEVK 75 C L N++I +Z CI +TT C G C + B V++ P + C + YZ Sbjct: 1 CZLTNITITVZVKCLTFCISINTTWCAGYCTTGRBLVYKBPARPBIZKTCTYRZLVYZTV 60 Query: 76 HIQGCPESI----TYPVATNCYCSACNTKDTYCT 105 + GC TYPVAT C+C C++ T CT Sbjct: 61 KVPGCAHHABSLYTYPVATZCHCGKCBSBSTBCT 94
sp|P12656|TSHB_MOUSE THYROTROPIN BETA CHAIN PRECURSOR (THYROID-STIMULATING HORMONE) (TSH-B) >gi|91819|pir||A29479 thyrotropin beta chain precursor - mouse >gi|202183 (M54943) thyroid stimulating hormone beta-subunit [Mus musculus] >gi|202187 (M22740) thyrotropin beta-subunit precursor [Mus musculus] >gi|202194 (M20537) thyrotropin [Mus musculus] Length = 138 Score = 52.7 bits (124), Expect = 9e-07 Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 27 IPMERCGQRVCIHTTICEGLCFSED--AVFESPDEAPEHRVCN-GDWSYEVKHIQGCPES 83 + C + I+TTIC G C + D P A VC D+ Y I GCP Sbjct: 31 VDRRECAYCLTINTTICAGYCMTRDINGKLFLPKYALSQDVCTYRDFIYRTVEIPGCPHH 90 Query: 84 IT----YPVATNCYCSACNTKDTYC 104 +T +PVA +C C CNT ++ C Sbjct: 91 VTPYFSFPVAVSCKCGKCNTDNSDC 115
pir||TTBOB thyrotropin beta chain - bovine Length = 113 Score = 52.7 bits (124), Expect = 9e-07 Identities = 30/97 (30%), Positives = 44/97 (44%), Gaps = 17/97 (17%) Query: 27 IPMERCGQRVCIHTTICEGLCFSEDAVFES--PDEAPEHRVCN-GDWSYEVKHIQGCPES 83 + + C + I+TT+C G C + B + P A VC D+ Y+ I GCP Sbjct: 11 VERKECAYCLTINTTVCAGYCMTRBVBGKLFLPKYALSQDVCTYRDFMYKTAEIPGCPRH 70 Query: 84 IT----YPVATNCYCSACNT----------KDTYCTR 106 +T YPVA +C C C+T K YCT+ Sbjct: 71 VTPYFSYPVAISCKCGKCBTBYSBCIHEAIKTNYCTK 107
pir||A61091 lutropin beta chain precursor - chicken Length = 158 Score = 51.9 bits (122), Expect = 2e-06 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 20 CHLKNVSIPMER--CGQRVCIHTTICEGLCFSEDAVFESPDEAPEHRVCN-GDWSYEVKH 76 C NV++ +E+ C Q + + TT C G C + + V+ SP P C G YE Sbjct: 48 CRPINVTVAVEKDGCPQCMAVTTTACGGYCRTREPVYRSPLGPPPQSACTYGALRYERWA 107 Query: 77 IQGCP----ESITYPVATNCYCSACNTKDTYCT 105 + GCP + PVA +C C+ C + CT Sbjct: 108 LWGCPIGSDPRVLLPVALSCRCARCPMATSDCT 140 CPU time: 0.65 user secs. 0.13 sys. secs 0.78 total secs. Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR Posted date: Jan 5, 1999 6:53 PM Number of letters in database: 105,452,721 Number of sequences in database: 345,453 Lambda K H 0.324 0.138 0.00 Gapped Lambda K H 0.270 0.0470 7.29e-304 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24887413 Number of Sequences: 345453 Number of extensions: 1007167 Number of successful extensions: 2692 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 58 Number of HSP's that attempted gapping in prelim test: 2519 Number of HSP's gapped (non-prelim): 126 length of query: 114 length of database: 105452721 effective HSP length: 42 effective length of query: 72 effective length of database: 90943695 effective search space: 6547946040 effective search space used: 6547946040 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 40 (21.6 bits) S2: 64 (29.3 bits)