BLASTN 2.0.6 [Sept-16-1998]
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Score E Sequences producing significant alignments: (bits) Value gb|U12923|FHU12923 Fundulus heteroclitus gonadotropin, alpha su... 749 0.0 gb|M94038|AANGONA Acanthopagrus latus gonadotropin alpha-subuni... 153 3e-35 gb|L35071|MOZGONAA Morone saxatilis gonadotropin alpha-subunit ... 125 6e-27 emb|Y16326|EBLHPRA Equus burchelli mRNA for luteinizing hormone... 66 5e-09 emb|X85170|EARNAGHAS E.asinus mRNA for glycoprotein hormone alp... 66 5e-09 emb|X61038|AAGHA A.anguilla mRNA for glycoprotein hormone alpha... 64 2e-08 gb|S70833|S70833 pituitary glycoprotein hormone alpha-subunit [... 62 7e-08 gb|M33698|TKYPGHX M.gallopavo pituitary glycoprotein hormone al... 62 7e-08 emb|X56497|CCGTHA1 Carp GTH alpha 1 gene coding for gonadotropi... 60 3e-07 gb|M37379|CYIGTHAI Carp gonadotropin type I mRNA, complete cds. 60 3e-07 gb|S77059|S77059 gonadotropin alpha subunit [Oncorhynchus tscha... 58 1e-06 gb|S77061|S77061 gonadotropin alpha subunit [Oncorhynchus tscha... 58 1e-06 gb|M27152|ONHGTHA Chum salmon gonadotropin-I alpha subunit (sGT... 58 1e-06 gb|M27653|ONHGLYPB Salmon glycoprotein hormone alpha-subunit mR... 58 1e-06 gb|S69274|S69274 gonadotrophin alpha 2 subunit [Oncorhynchus ma... 58 1e-06 emb|X90776|PSRNABETH P.sungorus mRNA for alpha subunit of glyco... 58 1e-06 dbj|D00768|PIGPGHAS3 Pig pituitary glycoprotein hormone alpha s... 56 5e-06 emb|X61050|CIGONADA C.idella mRNA for gonadotropin alpha subunit 54 2e-05 gb|AF017449|AF017449 Macropus rufus common glycoprotein hormone... 54 2e-05 gb|M37380|CYIGTHAII Carp gonadotropin type II mRNA, complete cds. 52 7e-05 gb|M27462|HRSCGAS Equus caballus chorionic gonadotropin alpha-s... 50 3e-04 dbj|AB000200|AB000200 Horse mRNA for equine chorionic gonadotro... 50 3e-04 gb|AF004520|AF004520 Trichosurus vulpecula gonadotrophin alpha ... 46 0.004 gb|AF017447|AF017447 Trichosurus vulpecula common glycoprotein ... 46 0.004 emb|X00050|BTPASH Bovine mRNA for alpha-subunit of pituitary ho... 46 0.004 emb|X00004|BTPGPHA3 .taurus gene encoding pituitary glycoprotei... 46 0.004 dbj|D86551|D86551 Goldfish mRNA for gonadotropin alpha subunit,... 44 0.017 emb|X16977|OAPGHAS Sheep mRNA for alpha subunit of pituitary gl... 44 0.017 dbj|D86552|D86552 Goldfish mRNA for gonadotropin alpha subunit,... 42 0.069 emb|X97760|CGGPHA C.gariepinus mRNA for glycoprotein hormone al... 38 1.1 gb|AC005824|ATAC005824 Arabidopsis thaliana chromosome II BAC F... 38 1.1 gb|U04446|CJU04446 Callithrix jacchus chorionic gonadotropin al... 38 1.1 emb|V00518|HSGONA Human messenger RNA for chorionic gonadotropin. 38 1.1 emb|Y08966|ATABI2DNA A.thaliana gene encoding ABI2 protein 38 1.1 emb|V00486|HSAGC3 H.sapiens chorionic gonadotropin gene, exon 3... 38 1.1 gb|S70584|S70581S3 thyroid-stimulating hormone alpha subunit [h... 38 1.1 gb|AC005357|AC005357 Homo sapiens chromosome 19, cosmid F16593,... 36 4.3 gb|U12427|ENU12427 Emericella nidulans myosin I heavy chain (my... 36 4.3 gb|AF074983|HUMYH66C10 Homo sapiens full length insert cDNA YH6... 36 4.3 gb|AF067219|CELR12E2 Caenorhabditis elegans cosmid R12E2 36 4.3 gb|AF039043|CELF39C12 Caenorhabditis elegans cosmid F39C12 36 4.3 emb|X63092|XLCOUPTFM X.laevis mRNA for COUP transcription factor 36 4.3
gb|U12923|FHU12923 Fundulus heteroclitus gonadotropin, alpha subunit (GTH) mRNA, complete cds. Length = 378 Score = 749 bits (378), Expect = 0.0 Identities = 378/378 (100%), Positives = 378/378 (100%) Query: 1 atggtatctgctgtcacgactatgggctgcatgaaggcagccggcgtgtctcttcttctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggtatctgctgtcacgactatgggctgcatgaaggcagccggcgtgtctcttcttctc 60 Query: 61 ttgtattttctactgaacgcagctgattctcatcccaactttgattcctcaagcatggcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttgtattttctactgaacgcagctgattctcatcccaactttgattcctcaagcatggcc 120 Query: 121 tgtggggaatgcagcctgggactgaacaggcttttttctcgggatcgtccgctctaccag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgtggggaatgcagcctgggactgaacaggcttttttctcgggatcgtccgctctaccag 180 Query: 181 tgcatgggttgctgcttctcccgagcgtaccccacgcctcaaacagccatacagacgatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgcatgggttgctgcttctcccgagcgtaccccacgcctcaaacagccatacagacgatg 240 Query: 241 gcgatcccgaagaacatcacttcagaggcaaagtgctgcgttgcgaagcacagctacgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gcgatcccgaagaacatcacttcagaggcaaagtgctgcgttgcgaagcacagctacgag 300 Query: 301 acaaaagtagatgacataacagtgagaaaccacacagagtgtcactgcagcacctgctac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acaaaagtagatgacataacagtgagaaaccacacagagtgtcactgcagcacctgctac 360 Query: 361 tatcacaaattgatatga 378 |||||||||||||||||| Sbjct: 361 tatcacaaattgatatga 378
gb|M94038|AANGONA Acanthopagrus latus gonadotropin alpha-subunit (GTH-alpha) mRNA, complete cds. Length = 736 Score = 153 bits (77), Expect = 3e-35 Identities = 173/205 (84%), Positives = 173/205 (84%) Query: 161 gggatcgtccgctctaccagtgcatgggttgctgcttctcccgagcgtaccccacgcctc 220 ||||||||||| | |||||||||||||| |||||||||||| |||||||||| ||||||| Sbjct: 161 gggatcgtccgatttaccagtgcatgggctgctgcttctccagagcgtacccaacgcctc 220 Query: 221 aaacagccatacagacgatggcgatcccgaagaacatcacttcagaggcaaagtgctgcg 280 | ||||| |||||||| ||||||||||||||||||| || ||||| | ||||||| Sbjct: 221 tcaaggccatgaagacgatgacgatcccgaagaacatcacctccgaggctacatgctgcg 280 Query: 281 ttgcgaagcacagctacgagacaaaagtagatgacataacagtgagaaaccacacagagt 340 | || |||||| |||||||||| | || | | ||||| ||||| ||||||||||| | Sbjct: 281 tcgcaaagcacgtctacgagacagaggtggccggcataagggtgaggaaccacacagact 340 Query: 341 gtcactgcagcacctgctactatca 365 | ||||||||||||||||||||||| Sbjct: 341 gccactgcagcacctgctactatca 365
gb|L35071|MOZGONAA Morone saxatilis gonadotropin alpha-subunit precursor, mRNA, complete cds Length = 626 Score = 125 bits (63), Expect = 6e-27 Identities = 165/199 (82%), Positives = 165/199 (82%) Query: 161 gggatcgtccgctctaccagtgcatgggttgctgcttctcccgagcgtaccccacgcctc 220 ||||||| ||| |||| ||||||||||| || ||||||||| |||||||||| || |||| Sbjct: 174 gggatcgcccggtctatcagtgcatgggctgttgcttctccagagcgtacccaacacctc 233 Query: 221 aaacagccatacagacgatggcgatcccgaagaacatcacttcagaggcaaagtgctgcg 280 | ||||| |||||||| | ||||||||||||||||| || ||||| | ||||||| Sbjct: 234 tcaaggccatgaagacgatgactatcccgaagaacatcacctcggaggccacatgctgcg 293 Query: 281 ttgcgaagcacagctacgagacaaaagtagatgacataacagtgagaaaccacacagagt 340 | || |||||||||||||||||| | || | | ||||| ||| ||||||||||||| | Sbjct: 294 tcgcaaagcacagctacgagacagaggtggccggcataaaggtgcgaaaccacacagact 353 Query: 341 gtcactgcagcacctgcta 359 | ||||||||||||||||| Sbjct: 354 gccactgcagcacctgcta 372
emb|Y16326|EBLHPRA Equus burchelli mRNA for luteinizing hormone alpha subunit Length = 363 Score = 65.9 bits (33), Expect = 5e-09 Identities = 39/41 (95%), Positives = 39/41 (95%) Query: 175 taccagtgcatgggttgctgcttctcccgagcgtaccccac 215 |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 160 taccagtgcatgggctgctgcttctccagagcgtaccccac 200
emb|X85170|EARNAGHAS E.asinus mRNA for glycoprotein hormone alpha subunit Length = 431 Score = 65.9 bits (33), Expect = 5e-09 Identities = 39/41 (95%), Positives = 39/41 (95%) Query: 175 taccagtgcatgggttgctgcttctcccgagcgtaccccac 215 |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 194 taccagtgcatgggctgctgcttctccagagcgtaccccac 234
emb|X61038|AAGHA A.anguilla mRNA for glycoprotein hormone alpha subunit precursor Length = 623 Score = 63.9 bits (32), Expect = 2e-08 Identities = 41/44 (93%), Positives = 41/44 (93%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaatt 371 ||||||||||| || |||||||||||||||||||| |||||||| Sbjct: 311 aaccacacagactgccactgcagcacctgctactaccacaaatt 354
Score = 40.1 bits (20), Expect = 0.27 Identities = 29/32 (90%), Positives = 29/32 (90%) Query: 250 aagaacatcacttcagaggcaaagtgctgcgt 281 ||||||||||| || ||||||| ||||||||| Sbjct: 239 aagaacatcacatctgaggcaacgtgctgcgt 270
gb|S70833|S70833 pituitary glycoprotein hormone alpha-subunit [Coturnix coturnix=Japanese quails, ssp. japonica, adenohypophyseal, mRNA, 695 nt] Length = 695 Score = 61.9 bits (31), Expect = 7e-08 Identities = 40/43 (93%), Positives = 40/43 (93%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaat 370 ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 385 aaccacacagactgtcactgcagtacctgctactatcataaat 427
gb|M33698|TKYPGHX M.gallopavo pituitary glycoprotein hormone alpha subunit mRNA, complete cds. Length = 760 Score = 61.9 bits (31), Expect = 7e-08 Identities = 40/43 (93%), Positives = 40/43 (93%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaat 370 ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 404 aaccacacagactgtcactgcagtacctgctactatcataaat 446
emb|X56497|CCGTHA1 Carp GTH alpha 1 gene coding for gonadotropin alpha 1 subunit Length = 1152 Score = 60.0 bits (30), Expect = 3e-07 Identities = 36/38 (94%), Positives = 36/38 (94%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatca 365 ||||||||||| || ||||||||||||||||||||||| Sbjct: 707 aaccacacagactgccactgcagcacctgctactatca 744
gb|M37379|CYIGTHAI Carp gonadotropin type I mRNA, complete cds. Length = 820 Score = 60.0 bits (30), Expect = 3e-07 Identities = 36/38 (94%), Positives = 36/38 (94%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatca 365 ||||||||||| || ||||||||||||||||||||||| Sbjct: 346 aaccacacagactgccactgcagcacctgctactatca 383
gb|S77059|S77059 gonadotropin alpha subunit [Oncorhynchus tschawytscha=chinook salmon, pituitary, mRNA, 678 nt] Length = 678 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%), Positives = 29/29 (100%) Query: 328 aaccacacagagtgtcactgcagcacctg 356 ||||||||||||||||||||||||||||| Sbjct: 362 aaccacacagagtgtcactgcagcacctg 390
gb|S77061|S77061 gonadotropin alpha subunit [Oncorhynchus tschawytscha=chinook salmon, Genomic, 3558 nt] Length = 3558 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%), Positives = 29/29 (100%) Query: 328 aaccacacagagtgtcactgcagcacctg 356 ||||||||||||||||||||||||||||| Sbjct: 3084 aaccacacagagtgtcactgcagcacctg 3112
gb|M27152|ONHGTHA Chum salmon gonadotropin-I alpha subunit (sGTHI-alpha) mRNA, complete cds. Length = 626 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%), Positives = 29/29 (100%) Query: 328 aaccacacagagtgtcactgcagcacctg 356 ||||||||||||||||||||||||||||| Sbjct: 318 aaccacacagagtgtcactgcagcacctg 346
gb|M27653|ONHGLYPB Salmon glycoprotein hormone alpha-subunit mRNA, complete cds. Length = 633 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%), Positives = 29/29 (100%) Query: 328 aaccacacagagtgtcactgcagcacctg 356 ||||||||||||||||||||||||||||| Sbjct: 328 aaccacacagagtgtcactgcagcacctg 356
gb|S69274|S69274 gonadotrophin alpha 2 subunit [Oncorhynchus masou=masu salmon, mRNA, 365 nt] Length = 365 Score = 58.0 bits (29), Expect = 1e-06 Identities = 29/29 (100%), Positives = 29/29 (100%) Query: 328 aaccacacagagtgtcactgcagcacctg 356 ||||||||||||||||||||||||||||| Sbjct: 309 aaccacacagagtgtcactgcagcacctg 337
emb|X90776|PSRNABETH P.sungorus mRNA for alpha subunit of glycoprotein hormone Length = 393 Score = 58.0 bits (29), Expect = 1e-06 Identities = 38/41 (92%), Positives = 38/41 (92%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaa 368 |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 121 aaccacacggagtgccactgcagtacctgctactatcacaa 161
dbj|D00768|PIGPGHAS3 Pig pituitary glycoprotein hormone alpha subunit gene, exons 3 and 4 and 3'flank Length = 1332 Score = 56.0 bits (28), Expect = 5e-06 Identities = 37/40 (92%), Positives = 37/40 (92%) Query: 173 tctaccagtgcatgggttgctgcttctcccgagcgtaccc 212 |||| ||||||||||| |||||||||||| |||||||||| Sbjct: 236 tctatcagtgcatgggctgctgcttctccagagcgtaccc 275
emb|X61050|CIGONADA C.idella mRNA for gonadotropin alpha subunit Length = 801 Score = 54.0 bits (27), Expect = 2e-05 Identities = 39/43 (90%), Positives = 39/43 (90%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaat 370 ||||||||||| || ||||| |||||||| ||||||||||||| Sbjct: 331 aaccacacagactgccactgtagcacctgttactatcacaaat 373
gb|AF017449|AF017449 Macropus rufus common glycoprotein hormone alpha-subunit mRNA, complete cds Length = 744 Score = 54.0 bits (27), Expect = 2e-05 Identities = 39/43 (90%), Positives = 39/43 (90%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaat 370 ||||||||||| || |||||||| |||||||| |||||||||| Sbjct: 426 aaccacacagaatgccactgcagtacctgctattatcacaaat 468
gb|M37380|CYIGTHAII Carp gonadotropin type II mRNA, complete cds. Length = 784 Score = 52.0 bits (26), Expect = 7e-05 Identities = 35/38 (92%), Positives = 35/38 (92%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatca 365 ||||||||||| || |||||||||||||| |||||||| Sbjct: 340 aaccacacagactgccactgcagcacctgttactatca 377
gb|M27462|HRSCGAS Equus caballus chorionic gonadotropin alpha-subunit (CG) mRNA, 3' end. Length = 552 Score = 50.1 bits (25), Expect = 3e-04 Identities = 37/41 (90%), Positives = 37/41 (90%) Query: 175 taccagtgcatgggttgctgcttctcccgagcgtaccccac 215 |||||||| | ||| |||||||||||| ||||||||||||| Sbjct: 79 taccagtgtaagggctgctgcttctccagagcgtaccccac 119
dbj|AB000200|AB000200 Horse mRNA for equine chorionic gonadotropin alpha-subunit, complete cds Length = 387 Score = 50.1 bits (25), Expect = 3e-04 Identities = 37/41 (90%), Positives = 37/41 (90%) Query: 175 taccagtgcatgggttgctgcttctcccgagcgtaccccac 215 |||||||| | ||| |||||||||||| ||||||||||||| Sbjct: 169 taccagtgtaagggctgctgcttctccagagcgtaccccac 209
gb|AF004520|AF004520 Trichosurus vulpecula gonadotrophin alpha subunit mRNA, complete cds Length = 756 Score = 46.1 bits (23), Expect = 0.004 Identities = 38/43 (88%), Positives = 38/43 (88%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaat 370 ||||||||||| || |||||||| ||||| || |||||||||| Sbjct: 433 aaccacacagaatgccactgcagtacctgttattatcacaaat 475
gb|AF017447|AF017447 Trichosurus vulpecula common glycoprotein hormone alpha-subunit mRNA, complete cds Length = 730 Score = 46.1 bits (23), Expect = 0.004 Identities = 38/43 (88%), Positives = 38/43 (88%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaat 370 ||||||||||| || |||||||| ||||| || |||||||||| Sbjct: 425 aaccacacagaatgccactgcagtacctgttattatcacaaat 467
emb|X00050|BTPASH Bovine mRNA for alpha-subunit of pituitary hormones. (glycoprotein hormones). Length = 713 Score = 46.1 bits (23), Expect = 0.004 Identities = 38/43 (88%), Positives = 38/43 (88%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaat 370 |||||||| ||||| ||||||||||| || || |||||||||| Sbjct: 393 aaccacaccgagtgccactgcagcacttgttattatcacaaat 435
Score = 46.1 bits (23), Expect = 0.004 Identities = 38/43 (88%), Positives = 38/43 (88%) Query: 173 tctaccagtgcatgggttgctgcttctcccgagcgtaccccac 215 |||| ||||||||||| |||||||||||| | || |||||||| Sbjct: 235 tctatcagtgcatggggtgctgcttctccagggcataccccac 277
emb|X00004|BTPGPHA3 .taurus gene encoding pituitary glycoprotein hormone alpha subunit, exons 3 & 4 Length = 1404 Score = 46.1 bits (23), Expect = 0.004 Identities = 38/43 (88%), Positives = 38/43 (88%) Query: 328 aaccacacagagtgtcactgcagcacctgctactatcacaaat 370 |||||||| ||||| ||||||||||| || || |||||||||| Sbjct: 1072 aaccacaccgagtgccactgcagcacttgttattatcacaaat 1114
Score = 46.1 bits (23), Expect = 0.004 Identities = 38/43 (88%), Positives = 38/43 (88%) Query: 173 tctaccagtgcatgggttgctgcttctcccgagcgtaccccac 215 |||| ||||||||||| |||||||||||| | || |||||||| Sbjct: 288 tctatcagtgcatggggtgctgcttctccagggcataccccac 330
dbj|D86551|D86551 Goldfish mRNA for gonadotropin alpha subunit, partial cds Length = 323 Score = 44.1 bits (22), Expect = 0.017 Identities = 28/30 (93%), Positives = 28/30 (93%) Query: 328 aaccacacagagtgtcactgcagcacctgc 357 ||||||||||| || ||||||||||||||| Sbjct: 294 aaccacacagactgccactgcagcacctgc 323
emb|X16977|OAPGHAS Sheep mRNA for alpha subunit of pituitary glycoprotein hormones Length = 716 Score = 44.1 bits (22), Expect = 0.017 Identities = 34/38 (89%), Positives = 34/38 (89%) Query: 178 cagtgcatgggttgctgcttctcccgagcgtaccccac 215 ||||||||||| |||||||||||| | || |||||||| Sbjct: 233 cagtgcatggggtgctgcttctccagggcataccccac 270
dbj|D86552|D86552 Goldfish mRNA for gonadotropin alpha subunit, partial cds Length = 326 Score = 42.1 bits (21), Expect = 0.069 Identities = 27/29 (93%), Positives = 27/29 (93%) Query: 328 aaccacacagagtgtcactgcagcacctg 356 ||||||||||| || |||||||||||||| Sbjct: 297 aaccacacagactgccactgcagcacctg 325
emb|X97760|CGGPHA C.gariepinus mRNA for glycoprotein hormone alpha-subunit Length = 626 Score = 38.2 bits (19), Expect = 1.1 Identities = 31/35 (88%), Positives = 31/35 (88%) Query: 331 cacacagagtgtcactgcagcacctgctactatca 365 |||||||| || || |||||||| ||||||||||| Sbjct: 351 cacacagactgccattgcagcacttgctactatca 385
gb|AC005824|ATAC005824 Arabidopsis thaliana chromosome II BAC F15K20 genomic sequence, complete sequence [Arabidopsis thaliana] Length = 118196 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%), Positives = 19/19 (100%) Query: 48 gtctcttcttctcttgtat 66 ||||||||||||||||||| Sbjct: 87310 gtctcttcttctcttgtat 87328
gb|U04446|CJU04446 Callithrix jacchus chorionic gonadotropin alpha precursor, mRNA, complete cds Length = 363 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 178 cagtgcatgggttgctgcttctc 200 ||||||||||| ||||||||||| Sbjct: 163 cagtgcatgggctgctgcttctc 185
emb|V00518|HSGONA Human messenger RNA for chorionic gonadotropin. Length = 621 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 178 cagtgcatgggttgctgcttctc 200 ||||||||||| ||||||||||| Sbjct: 201 cagtgcatgggctgctgcttctc 223
emb|Y08966|ATABI2DNA A.thaliana gene encoding ABI2 protein Length = 1730 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 87 ttctcatcccaactttgattcct 109 ||||| ||||||||||||||||| Sbjct: 22 ttctcttcccaactttgattcct 44
emb|V00486|HSAGC3 H.sapiens chorionic gonadotropin gene, exon 3 >gi|183316|gb|J00151|HUMGLYCA3 Human glycoprotein, alpha-subunit gene: exon 3 and flanks. Length = 268 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 178 cagtgcatgggttgctgcttctc 200 ||||||||||| ||||||||||| Sbjct: 117 cagtgcatgggctgctgcttctc 139
gb|S70584|S70581S3 thyroid-stimulating hormone alpha subunit [human, Genomic, 268 nt, segment 3 of 4] Length = 268 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 178 cagtgcatgggttgctgcttctc 200 ||||||||||| ||||||||||| Sbjct: 117 cagtgcatgggctgctgcttctc 139
gb|AC005357|AC005357 Homo sapiens chromosome 19, cosmid F16593, complete sequence [Homo sapiens] Length = 38717 Score = 36.2 bits (18), Expect = 4.3 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 126 ggaatgcagcctgggact 143 |||||||||||||||||| Sbjct: 26162 ggaatgcagcctgggact 26145
gb|U12427|ENU12427 Emericella nidulans myosin I heavy chain (myoA) mRNA, complete cds. Length = 4120 Score = 36.2 bits (18), Expect = 4.3 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 211 cccacgcctcaaacagcc 228 |||||||||||||||||| Sbjct: 3290 cccacgcctcaaacagcc 3307
gb|AF074983|HUMYH66C10 Homo sapiens full length insert cDNA YH66C10 Length = 612 Score = 36.2 bits (18), Expect = 4.3 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 319 acagtgagaaaccacaca 336 |||||||||||||||||| Sbjct: 135 acagtgagaaaccacaca 152
gb|AF067219|CELR12E2 Caenorhabditis elegans cosmid R12E2 Length = 39439 Score = 36.2 bits (18), Expect = 4.3 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 313 gacataacagtgagaaac 330 |||||||||||||||||| Sbjct: 27658 gacataacagtgagaaac 27641
gb|AF039043|CELF39C12 Caenorhabditis elegans cosmid F39C12 Length = 40233 Score = 36.2 bits (18), Expect = 4.3 Identities = 21/22 (95%), Positives = 21/22 (95%) Query: 49 tctcttcttctcttgtattttc 70 ||||||||||||||| |||||| Sbjct: 24964 tctcttcttctcttgcattttc 24985
emb|X63092|XLCOUPTFM X.laevis mRNA for COUP transcription factor Length = 1410 Score = 36.2 bits (18), Expect = 4.3 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 87 ttctcatcccaactttga 104 |||||||||||||||||| Sbjct: 460 ttctcatcccaactttga 443 CPU time: 0.40 user secs. 0.10 sys. secs 0.50 total secs. Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences Posted date: Jan 5, 1999 8:16 PM Number of letters in database: 929,516,821 Number of sequences in database: 390,119 Lambda K H 1.37 0.711 0.00 Gapped Lambda K H 1.37 0.711 7.29e-304 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 172156 Number of Sequences: 390119 Number of extensions: 172156 Number of successful extensions: 43343 Number of sequences better than 10.0: 43 length of query: 378 length of database: 929516821 effective HSP length: 20 effective length of query: 358 effective length of database: 921714441 effective search space: 329973769878 effective search space used: 329973769878 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 18 (36.2 bits)