Fundulus GTH alpha BlastP

Commencing search, please wait for results.

BLASTP 2.0.6 [Sept-16-1998]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|531887 gonadotropin, alpha subunit
         (125 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           345,453 sequences; 105,452,721 total letters

Searching..................................................done

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs

Distribution of 60 Blast Hits on the Query Sequence

Fundulus GTH alpha BlastP alignment fig.gif (2928 bytes)


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P47744|GLHA_FUNHE  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   251  1e-66
sp|Q91119|GLHA_MORSA  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   173  4e-43
sp|P30970|GLHA_ACALA  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   173  4e-43
pir||I50992  gonadotropin alpha-subunit - Morone saxatilis >gi|1...   171  1e-42
sp|P37204|GLHA_THUOB  GLYCOPROTEIN HORMONES ALPHA CHAIN (GONADOT...   160  3e-39
bbs|125307  gonadotropin GPI alpha subunit, GPI alpha, GTHI alph...   157  3e-38
sp|P30983|GLHA_CTEID  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   129  7e-30
sp|P27794|GLHA_ANGAN  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   129  9e-30
sp|P37037|GLHA_HYPMO  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   129  9e-30
sp|P01221|GLH1_CYPCA  GLYCOPROTEIN HORMONES ALPHA CHAIN 1 PRECUR...   129  9e-30
pir||I51229  gonadotrophin alpha 1 subunit - cherry salmon >gi|5...   129  9e-30
sp|P13153|GLH2_ONCKE  GLYCOPROTEIN HORMONES ALPHA CHAIN 2 PRECUR...   127  4e-29
sp|P18857|GLH2_CYPCA  GLYCOPROTEIN HORMONES ALPHA CHAIN 2 PRECUR...   127  4e-29
pir||I51230  gonadotrophin alpha 2 subunit - cherry salmon >gi|5...   127  4e-29
sp|P01217|GLHA_BOVIN  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   126  6e-29
sp|P01218|GLHA_SHEEP  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   126  6e-29
sp|P13152|GLH1_ONCKE  GLYCOPROTEIN HORMONES ALPHA CHAIN 1 PRECUR...   124  2e-28
sp|P37035|GLHA_MELGA  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   124  2e-28
bbs|118507  gonadotropic hormone II alpha subunit, GTH II-alpha ...   123  3e-28
sp|P53542|GLHA_CLAGA  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   123  3e-28
gi|607  (X00050) alpha-subunit precursor [Bos taurus]                 123  5e-28
sp|P80665|GLHA_STRCA  GLYCOPROTEIN HORMONES ALPHA CHAIN               123  5e-28
sp|P01219|GLHA_PIG  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR ...   122  1e-27
prf||1010165A  lutropin alpha [Physeter catodon]                      122  1e-27
sp|O46687|GLHA_MACRU  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   121  2e-27
gi|3719213  (AF004520) gonadotrophin alpha subunit [Trichosurus ...   121  2e-27
sp|P11963|GLH2_RAT  GLYCOPROTEIN HORMONES ALPHA CHAIN 2 PRECURSO...   121  2e-27
sp|P12836|GLHA_MURCI  GLYCOPROTEIN HORMONES ALPHA CHAIN (GONADOT...   121  2e-27
sp|P25329|GLHA_PHYCA  GLYCOPROTEIN HORMONES ALPHA CHAIN               121  2e-27
sp|P01216|GLHA_MOUSE  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   121  2e-27
sp|P51499|GLHA_CALJA  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   121  2e-27
sp|P07474|GLHA_RABIT  GLYCOPROTEIN HORMONES ALPHA CHAIN >gi|9008...   120  3e-27
sp|P11962|GLH1_RAT  GLYCOPROTEIN HORMONES ALPHA CHAIN 1 PRECURSO...   120  5e-27
prf||731693A  intestinal cell stimulating hormone [Ovis aries]        119  8e-27
gi|206111  (J00757) glycoprotein hormone alpha subunit [Rattus n...   118  1e-26
sp|P37036|GLHA_BALAC  GLYCOPROTEIN HORMONES ALPHA CHAIN >gi|3201...   118  1e-26
gnl|PID|e1248979  (Y16326) luteinizing hormone alpha subunit [Eq...   118  1e-26
sp|Q28365|GLHA_EQUAS  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   117  2e-26
prf||760571A  thyrotropin alpha [Sus scrofa domestica]                116  4e-26
gnl|PID|d1013799  (D86552) gonadotropin alpha subunit [Carassius...   115  1e-25
sp|P22762|GLHA_MACMU  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   114  3e-25
gnl|PID|d1013798  (D86551) gonadotropin alpha subunit [Carassius...   113  4e-25
sp|P80051|GLHA_RANCA  GLYCOPROTEIN HORMONES ALPHA CHAIN >gi|1042...   111  1e-24
sp|P01220|GLHA_HORSE  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   111  2e-24
pir||TTHOA  glycoprotein hormones alpha chain - horse                 109  7e-24
sp|P01215|GLHA_HUMAN  GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSO...   107  3e-23
pdb|1HCN|A  Homo sapiens                                              107  3e-23
gi|602448  (M27462) gonadotropin alpha 1subunit [Equus caballus]      107  3e-23
pdb|1HRP|A  Homo sapiens                                              107  3e-23
gi|204470  (M25544) pituitary hormone alpha subunit [Rattus norv...    88  3e-17
gnl|PID|e195654  (X90776) alpha subunit of glycoprotein hormones...    76  8e-14
prf||752113A  thyrotropin alpha producing factor [Bos taurus]          61  2e-09
prf||1601513A  lutropin alpha [Camelus dromedarius]                    60  7e-09
pir||S13200  lutropin - sheep                                          57  5e-08
pir||A60583  glycoprotein hormones alpha chain - ostrich (fragment)    56  8e-08
gi|204471  (M25544) last partial exon [Rattus norvegicus]              43  0.001
sp|Q01030|VG45_HSVSA  HYPOTHETICAL GENE 45 PROTEIN >gi|76676|pir...    31  4.4
gi|2660673  (AC002342) unknown protein [Arabidopsis thaliana]          30  7.6
sp|P27225|VE4_HPV42  PROBABLE E4 PROTEIN >gi|73429|pir||W4WL42 E...    29  9.9
gnl|PID|d1031081  (AP000004) 170aa long hypothetical protein [Py...    29  9.9

 sp|P47744|GLHA_FUNHE GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR (GONADOTROPIN ALPHA
           CHAIN) (GTH-ALPHA) >gi|531887 (U12923) gonadotropin,
           alpha subunit [Fundulus heteroclitus]
           Length = 125
           
 Score =  251 bits (635), Expect = 1e-66
 Identities = 117/125 (93%), Positives = 117/125 (93%)

Query: 1   MVSAVTTMGCMKAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRDRPLYQ 60
           MVSAVTTMGCMKAAGVS        NAADSHPNFDSSSMACGECSLGLNRLFSRDRPLYQ
Sbjct: 1   MVSAVTTMGCMKAAGVSLLLLYFLLNAADSHPNFDSSSMACGECSLGLNRLFSRDRPLYQ 60

Query: 61  CMGCCFSRAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCY 120
           CMGCCFSRAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCY
Sbjct: 61  CMGCCFSRAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCY 120

Query: 121 YHKLI 125
           YHKLI
Sbjct: 121 YHKLI 125

 sp|Q91119|GLHA_MORSA GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR (GONADOTROPIN ALPHA
           CHAIN) (GTH-ALPHA) >gi|2322657 (L35071) gonadotropin
           alpha-subunit precursor [Morone saxatilis]
           Length = 117
           
 Score =  173 bits (434), Expect = 4e-43
 Identities = 76/117 (64%), Positives = 91/117 (76%)

Query: 8   MGCMKAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRDRPLYQCMGCCFS 67
           MG +K+AG+S           DS+P+ D S+M C EC+L  N +FSRDRP+YQCMGCCFS
Sbjct: 1   MGSVKSAGLSLLLLSFILYVVDSYPSMDLSNMGCEECTLRKNSVFSRDRPVYQCMGCCFS 60

Query: 68  RAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHKL 124
           RAYPTP  A++TM IPKNITSEA CCVAKHSYET+V  I VRNHT+CHCSTCY+HK+
Sbjct: 61  RAYPTPLKAMKTMTIPKNITSEATCCVAKHSYETEVAGIKVRNHTDCHCSTCYFHKI 117

 sp|P30970|GLHA_ACALA GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR (GONADOTROPIN ALPHA
           CHAIN) (GTH-ALPHA) >gi|210877 (M94038) gonadotropin
           alpha-subunit [Acanthophagrus latus]
           Length = 117
           
 Score =  173 bits (434), Expect = 4e-43
 Identities = 77/117 (65%), Positives = 90/117 (76%)

Query: 8   MGCMKAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRDRPLYQCMGCCFS 67
           MG +K+AG+S          ADS+PN D S+M C  C+L  N +FSRDRP+YQCMGCCFS
Sbjct: 1   MGSVKSAGLSLLLLSFLLYVADSYPNTDLSNMGCEACTLRKNTVFSRDRPIYQCMGCCFS 60

Query: 68  RAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHKL 124
           RAYPTP  A++TM IPKNITSEA CCVAKH YET+V  I VRNHT+CHCSTCYYHK+
Sbjct: 61  RAYPTPLKAMKTMTIPKNITSEATCCVAKHVYETEVAGIRVRNHTDCHCSTCYYHKI 117

 pir||I50992 gonadotropin alpha-subunit - Morone saxatilis
           >gi|1581992|prf||2117355C gonadotropin:SUBUNIT=alpha
           [Morone saxatilis]
           Length = 117
           
 Score =  171 bits (430), Expect = 1e-42
 Identities = 76/117 (64%), Positives = 90/117 (75%)

Query: 8   MGCMKAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRDRPLYQCMGCCFS 67
           MG +K+AG+S           DS+P+ D S+M C EC+L  N +FSRDRP+YQCMGCCFS
Sbjct: 1   MGSVKSAGLSLLLLSFILYVVDSYPSMDLSNMGCEECTLRKNSVFSRDRPVYQCMGCCFS 60

Query: 68  RAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHKL 124
           RAYPTP  A++TM IPKNITSEA CCVAKHSYET+V  I VRNHT CHCSTCY+HK+
Sbjct: 61  RAYPTPLKAMKTMTIPKNITSEATCCVAKHSYETEVAGIKVRNHTGCHCSTCYFHKI 117

 sp|P37204|GLHA_THUOB GLYCOPROTEIN HORMONES ALPHA CHAIN (GONADOTROPIN ALPHA CHAIN)
           (GTH-ALPHA) >gi|546062|bbs|147786 gonadotropin I alpha
           subunit, tGTH I alpha [Thunnus obesus=tuna, pituitary
           glands, Peptide, 94 aa]
           Length = 94
           
 Score =  160 bits (401), Expect = 3e-39
 Identities = 68/93 (73%), Positives = 79/93 (84%)

Query: 31  HPNFDSSSMACGECSLGLNRLFSRDRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           +PN D S+M C EC+L  N +FSRDRP+YQCMGCCFSRA+PTP  A++TM IPKNITSEA
Sbjct: 1   YPNVDLSNMGCEECTLKKNNVFSRDRPIYQCMGCCFSRAFPTPLKAMKTMTIPKNITSEA 60

Query: 91  KCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
            CCVAKHSYET+V  I VRNHT+CHCSTCY+HK
Sbjct: 61  TCCVAKHSYETEVAGIRVRNHTDCHCSTCYFHK 93

 bbs|125307 gonadotropin GPI alpha subunit, GPI alpha, GTHI alpha [Katsuwonus
           plelamis=bonito, pituitary gland, Peptide, 94 aa]
           Length = 94
           
 Score =  157 bits (392), Expect = 3e-38
 Identities = 67/93 (72%), Positives = 78/93 (83%)

Query: 31  HPNFDSSSMACGECSLGLNRLFSRDRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           +PN D S+M C EC+L  N +FSRDRP+YQCMGCCFSRA+PTP  A++TM IPKNITSEA
Sbjct: 1   YPNVDLSNMGCEECTLKKNNVFSRDRPIYQCMGCCFSRAFPTPLKAMKTMTIPKNITSEA 60

Query: 91  KCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
            CCVAKHSYET+V  I VRNHT+CHCSTC +HK
Sbjct: 61  TCCVAKHSYETEVAGIRVRNHTDCHCSTCTFHK 93

 sp|P30983|GLHA_CTEID GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR (GONADOTROPIN ALPHA
           CHAIN) (GTH-ALPHA) >gi|103824|pir||S16762 gonadotropin
           alpha chain - grass carp >gi|62707 (X61050) alpha
           subunit of grass carp gonadotropin [Ctenopharyngodon
           idella]
           Length = 118
           
 Score =  129 bits (321), Expect = 7e-30
 Identities = 58/111 (52%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 14  AGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPT 72
           AG S        +    +P  D ++  C EC L  N +FS+   P+YQCMGCCFSRAYPT
Sbjct: 7   AGASILLFLMLIHLGQVYPRNDMTNFGCEECKLKENNIFSKPGAPVYQCMGCCFSRAYPT 66

Query: 73  PQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           P  + +TM +PKNITSEA CCVAK      V+D+ + NHT+CHCSTCYYHK
Sbjct: 67  PLRSKKTMLVPKNITSEATCCVAKEVKRVLVNDVKLVNHTDCHCSTCYYHK 117

 sp|P27794|GLHA_ANGAN GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR (GONADOTROPIN ALPHA
           CHAIN) (GTH-ALPHA) >gi|103797|pir||A37198 glycoprotein
           hormones alpha chain precursor - European eel >gi|62394
           (X61038) glycoprotein hormone alpha subunit precursor
           [Anguilla anguilla]
           Length = 117
           
 Score =  129 bits (320), Expect = 9e-30
 Identities = 58/117 (49%), Positives = 78/117 (66%), Gaps = 3/117 (2%)

Query: 8   MGCMKAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCF 66
           M C    G S        +  DS+PN + +   C EC L  N++FS+   P++QC+GCCF
Sbjct: 2   MVCPGKPGASLLMLSMLFHIIDSYPNNEMARGGCDECRLQENKIFSKPSAPIFQCVGCCF 61

Query: 67  SRAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           SRAYPTP  + +TM +PKNITSEA CCVA+    T++D++ + NHT+CHCSTCYYHK
Sbjct: 62  SRAYPTPLRSKKTMLVPKNITSEATCCVARE--VTRLDNMKLENHTDCHCSTCYYHK 116

 sp|P37037|GLHA_HYPMO GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR (GONADOTROPIN ALPHA
           CHAIN) (GTH-ALPHA) >gi|321067|pir||A60626 glycoprotein
           hormones alpha chain precursor - silver carp
           Length = 118
           
 Score =  129 bits (320), Expect = 9e-30
 Identities = 58/111 (52%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 14  AGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPT 72
           AG S        +    +P  D ++  C EC L  N +FS+   P+YQCMGCCFSRAYPT
Sbjct: 7   AGASILLFLMLIHLGQVYPRNDITNFGCEECKLKENNIFSKPGAPVYQCMGCCFSRAYPT 66

Query: 73  PQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           P  + +TM +PKNITSEA CCVAK      V+D+ + NHT+CHCSTCYYHK
Sbjct: 67  PLRSKKTMLVPKNITSEATCCVAKEVKRVLVNDVKLVNHTDCHCSTCYYHK 117

 sp|P01221|GLH1_CYPCA GLYCOPROTEIN HORMONES ALPHA CHAIN 1 PRECURSOR (GONADOTROPIN ALPHA
           CHAIN 1) (GTH-ALPHA) >gi|2144637|pir||UTCAA glycoprotein
           hormones alpha-1 chain - common carp >gi|62624 (X56497)
           gonadotropin alpha 1 subunit [Cyprinus carpio]
           >gi|213054 (M37379) gonadotropin type I precursor
           [Cyprinus carpio]
           Length = 118
           
 Score =  129 bits (320), Expect = 9e-30
 Identities = 58/111 (52%), Positives = 71/111 (63%), Gaps = 1/111 (0%)

Query: 14  AGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPT 72
           AG S             +P  D ++  C EC L  N +FS+   P+YQCMGCCFSRAYPT
Sbjct: 7   AGASILLFFMLIRLGQLYPRNDMNNFGCEECKLKENNIFSKPGAPVYQCMGCCFSRAYPT 66

Query: 73  PQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           P  + +TM +PKNITSEA CCVAK      V+D+ + NHT+CHCSTCYYHK
Sbjct: 67  PLRSKKTMLVPKNITSEATCCVAKEVKRVLVNDVKLVNHTDCHCSTCYYHK 117

 pir||I51229 gonadotrophin alpha 1 subunit - cherry salmon >gi|546258|bbs|145444
           (S69273) gonadotrophin alpha 1 subunit, GTH alpha 1
           [Oncorhynchus masou=masu salmon, Peptide, 119 aa]
           [Oncorhynchus masou]
           Length = 119
           
 Score =  129 bits (320), Expect = 9e-30
 Identities = 57/97 (58%), Positives = 70/97 (71%), Gaps = 1/97 (1%)

Query: 28  ADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPTPQTAIQTMAIPKNI 86
           ADS+PN D +++ C EC L  N+LFS    P+YQC GCCFSRAYPTP  + + M +PKNI
Sbjct: 22  ADSYPNSDMTNVGCEECKLKENKLFSNPGAPVYQCTGCCFSRAYPTPLQSKKAMLVPKNI 81

Query: 87  TSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           TSEA CCVAK      VD+I + NHTEC C+TCY+HK
Sbjct: 82  TSEATCCVAKEGERVVVDNIKLTNHTECWCNTCYHHK 118

 sp|P13153|GLH2_ONCKE GLYCOPROTEIN HORMONES ALPHA CHAIN 2 PRECURSOR (GONADOTROPIN 2 ALPHA
           CHAIN) (GTH-ALPHA) >gi|483061|pir||B60627 glycoprotein
           hormones alpha-2 chain precursor - chum salmon
           >gi|213422 (M27653) alpha-2 glycoprotein alpha-subunit
           [Oncorhynchus keta] >gi|213426 (M27152) gonadotropin-I
           alpha subunit precursor [Oncorhynchus keta]
           >gi|913956|bbs|163937 (S77059) gonadotropin alpha
           subunit, sGTH alpha [Oncorhynchus tschawytscha=chinook
           salmon, pituitary, Peptide, 114 aa] [Oncorhynchus
           tschawytscha] >gi|913958|bbs|163939 (S77061)
           gonadotropin alpha subunit, sGTH alpha [Oncorhynchus
           tschawytscha=chinook salmon, Peptide, 114 aa]
           [Oncorhynchus tschawytscha]
           Length = 114
           
 Score =  127 bits (315), Expect = 4e-29
 Identities = 63/117 (53%), Positives = 74/117 (62%), Gaps = 5/117 (4%)

Query: 8   MGCMKAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRDRPLYQCMGCCFS 67
           M  +K+ G+S          ADS+PN D ++M C EC+L  N +F     + QC GCCFS
Sbjct: 1   MCLLKSTGLSLILSALLV-IADSYPNSDKTNMGCEECTLKPNTIFPN---IMQCTGCCFS 56

Query: 68  RAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYE-TKVDDITVRNHTECHCSTCYYHK 123
           RAYPTP  + QTM +PKNITSEA CCVAK     T  D   V NHTECHCSTCYYHK
Sbjct: 57  RAYPTPLRSKQTMLVPKNITSEATCCVAKEGERVTTKDGFPVTNHTECHCSTCYYHK 113

 sp|P18857|GLH2_CYPCA GLYCOPROTEIN HORMONES ALPHA CHAIN 2 PRECURSOR (GONADOTROPIN ALPHA
           CHAIN 2) (GTH-ALPHA) >gi|85505|pir||A40554 glycoprotein
           hormones alpha-2 chain - common carp >gi|213056 (M37380)
           gonadotropin type II precursor [Cyprinus carpio]
           Length = 118
           
 Score =  127 bits (315), Expect = 4e-29
 Identities = 58/111 (52%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 14  AGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPT 72
           AG S        +    +P    ++  C EC L  N +FS+   P+YQCMGCCFSRAYPT
Sbjct: 7   AGASVLLFLMLIHLGQLYPRNYMNNFGCEECKLKENNIFSKPGAPVYQCMGCCFSRAYPT 66

Query: 73  PQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           P  + +TM +PKNITSEA CCVAK   +  V+DI + NHT+CHCSTCYYHK
Sbjct: 67  PLRSKKTMLVPKNITSEATCCVAKEFKQVLVNDIKLVNHTDCHCSTCYYHK 117

 pir||I51230 gonadotrophin alpha 2 subunit - cherry salmon >gi|546260|bbs|145448
           (S69274) gonadotrophin alpha 2 subunit, GTH alpha 2
           [Oncorhynchus masou=masu salmon, Peptide, 114 aa]
           [Oncorhynchus masou]
           Length = 114
           
 Score =  127 bits (315), Expect = 4e-29
 Identities = 63/117 (53%), Positives = 74/117 (62%), Gaps = 5/117 (4%)

Query: 8   MGCMKAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRDRPLYQCMGCCFS 67
           M  +K+ G+S          ADS+PN D ++M C EC+L  N +F     + QC GCCFS
Sbjct: 1   MCLLKSTGLSLILSALLV-IADSYPNSDKTNMGCEECTLKPNTIFPN---IIQCTGCCFS 56

Query: 68  RAYPTPQTAIQTMAIPKNITSEAKCCVAKHSYE-TKVDDITVRNHTECHCSTCYYHK 123
           RAYPTP  + QTM +PKNITSEA CCVAK     T  D   V NHTECHCSTCYYHK
Sbjct: 57  RAYPTPLRSKQTMLVPKNITSEATCCVAKEGERVTTKDGFPVTNHTECHCSTCYYHK 113

 sp|P01217|GLHA_BOVIN GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|69163|pir||TTBOA
           glycoprotein hormones alpha chain precursor - bovine
           >gi|1619593|gnl|PID|e274391 (X00003) pituitary
           glycoprotein hormone alpha subunit [Bos taurus]
           Length = 120
           
 Score =  126 bits (313), Expect = 6e-29
 Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ + +   C EC L  N+ FS+ D P+YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24  SFPDGEFTMQGCPECKLKENKYFSKPDAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           EA CCVAK  +  T + ++ V NHTECHCSTCYYHK
Sbjct: 84  EATCCVAKAFTKATVMGNVRVENHTECHCSTCYYHK 119

 sp|P01218|GLHA_SHEEP GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|538564|pir||UTSHA
           glycoprotein hormones alpha chain precursor - sheep
           >gi|1366 (X16977) precursor polypeptide (AA -24 to 96)
           [Ovis aries]
           Length = 120
           
 Score =  126 bits (313), Expect = 6e-29
 Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ + +   C EC L  N+ FS+ D P+YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24  SFPDGEFTMQGCPECKLKENKYFSKPDAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           EA CCVAK  +  T + ++ V NHTECHCSTCYYHK
Sbjct: 84  EATCCVAKAFTKATVMGNVRVENHTECHCSTCYYHK 119

 sp|P13152|GLH1_ONCKE GLYCOPROTEIN HORMONES ALPHA CHAIN 1 PRECURSOR (GONADOTROPIN 1 ALPHA
           CHAIN) (GTH-ALPHA) >gi|482606|pir||A60627 glycoprotein
           hormones alpha-1 chain precursor - chum salmon
           (fragment) >gi|213420 (M27652) alpha-1 glycoprotein
           alpha-subunit [Oncorhynchus keta]
           >gi|226338|prf||1507182A glycoprotein hormone alpha
           [Oncorhynchus sp.]
           Length = 108
           
 Score =  124 bits (309), Expect = 2e-28
 Identities = 55/97 (56%), Positives = 69/97 (70%), Gaps = 1/97 (1%)

Query: 28  ADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPTPQTAIQTMAIPKNI 86
           ADS+ N D +++ C EC L  N++FS    P+YQC GCCFSRAYPTP  + + M +PKNI
Sbjct: 11  ADSYQNSDMTNVGCEECKLKENKVFSNPGAPVYQCTGCCFSRAYPTPLQSKKAMLVPKNI 70

Query: 87  TSEAKCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           TSEA CCVAK      VD+I + NHTEC C+TCY+HK
Sbjct: 71  TSEATCCVAKEGERVVVDNIKLTNHTECWCNTCYHHK 107

 sp|P37035|GLHA_MELGA GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|345699|pir||A45585
           glycoprotein hormones alpha chain - turkey
           >gi|2134263|pir||I51241 pituitary glycoprotein hormone
           alpha-subunit - quail >gi|213896 (M33698) pituitary
           glycoprotein hormone alpha-subunit precursor [Meleagris
           gallopavo] >gi|546920|bbs|149232 (S70833) pituitary
           glycoprotein hormone alpha-subunit, PGH alpha-subunit
           [Coturnix coturnix=Japanese quails, ssp. japonica,
           adenohypophyseal, Peptide, 120 aa] [Coturnix coturnix]
           >gi|228573|prf||1806324A glycoprotein
           hormone:SUBUNIT=alpha [Gallus gallus]
           Length = 120
           
 Score =  124 bits (309), Expect = 2e-28
 Identities = 58/114 (50%), Positives = 73/114 (63%), Gaps = 2/114 (1%)

Query: 12  KAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAY 70
           K A V+        +   + P+ +     C EC LG NR FS+   P+YQC GCCFSRAY
Sbjct: 6   KYAAVTLTILSVFLHLLHTFPDGEFLMQGCPECKLGENRFFSKPGAPIYQCTGCCFSRAY 65

Query: 71  PTPQTAIQTMAIPKNITSEAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           PTP  + +TM +PKNITSEA CCVAK  +  T  D++ + NHT+CHCSTCYYHK
Sbjct: 66  PTPMRSKKTMLVPKNITSEATCCVAKAFTKITLKDNVKIENHTDCHCSTCYYHK 119

 bbs|118507 gonadotropic hormone II alpha subunit, GTH II-alpha [Clarias
           gariepinus=African catfish, pituitary glands, Peptide,
           92 aa]
           Length = 92
           
 Score =  123 bits (307), Expect = 3e-28
 Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 1/91 (1%)

Query: 34  FDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEAKC 92
           + ++   C EC L  N +FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITSEA C
Sbjct: 1   YPNNDFGCEECKLKENNIFSKPGAPVYQCMGCCFSRAYPTPLRSKKTMLVPKNITSEATC 60

Query: 93  CVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           CVAK      V+D+ + NHT+CHCSTCYYHK
Sbjct: 61  CVAKEVKRVIVNDVKLVNHTDCHCSTCYYHK 91

 sp|P53542|GLHA_CLAGA GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR (GONADOTROPIN ALPHA
           CHAIN) (GTH-ALPHA) >gi|1321780|gnl|PID|e242696 (X97760)
           glycoprotein hormone alpha subunit [Clarias gariepinus]
           Length = 116
           
 Score =  123 bits (307), Expect = 3e-28
 Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 1/91 (1%)

Query: 34  FDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEAKC 92
           + ++   C EC L  N +FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITSEA C
Sbjct: 25  YPNNDFGCEECKLKENNIFSKPGAPVYQCMGCCFSRAYPTPLRSKKTMLVPKNITSEATC 84

Query: 93  CVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           CVAK      V+D+ + NHT+CHCSTCYYHK
Sbjct: 85  CVAKEVKRVIVNDVKLVNHTDCHCSTCYYHK 115

 gi|607 (X00050) alpha-subunit precursor [Bos taurus]
           Length = 120
           
 Score =  123 bits (305), Expect = 5e-28
 Identities = 56/96 (58%), Positives = 69/96 (71%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ + +   C EC L  N+ FS+ D  +YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24  SFPDGEFTMQGCPECKLKENKYFSKPDAAIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           EA CCVAK  +  T + ++ V NHTECHCSTCYYHK
Sbjct: 84  EATCCVAKAFTKATVMGNVRVENHTECHCSTCYYHK 119

 sp|P80665|GLHA_STRCA GLYCOPROTEIN HORMONES ALPHA CHAIN
           Length = 96
           
 Score =  123 bits (305), Expect = 5e-28
 Identities = 56/94 (59%), Positives = 67/94 (70%), Gaps = 2/94 (2%)

Query: 32  PNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           P+ +     C EC LG NR FS+   P+YQC GCCFSRAYPTP  + +TM +PKNITSEA
Sbjct: 2   PDGEFLMQGCPECKLGENRFFSKPGAPVYQCTGCCFSRAYPTPLRSKKTMLVPKNITSEA 61

Query: 91  KCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
            CCVAK  +  T  D++ + NHTECHCSTCYYHK
Sbjct: 62  TCCVAKAFTKITLKDNVKIENHTECHCSTCYYHK 95

 sp|P01219|GLHA_PIG GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|1070550|pir||UTPGA
           glycoprotein hormones alpha chain precursor - pig
           >gi|217699|gnl|PID|d1001122 (D00768) pituitary
           glycoprotein hormone alpha subunit [Sus scrofa]
           >gi|226399|prf||1510300A glycoprotein hormone alpha [Sus
           scrofa domestica]
           Length = 120
           
 Score =  122 bits (302), Expect = 1e-27
 Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ + +   C EC L  N+ FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24  SFPDGEFTMQGCPECKLKENKYFSKLGAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           EA CCVAK  +  T + +  V NHTECHCSTCYYHK
Sbjct: 84  EATCCVAKAFTKATVMGNARVENHTECHCSTCYYHK 119

 prf||1010165A lutropin alpha [Physeter catodon]
           Length = 96
           
 Score =  122 bits (302), Expect = 1e-27
 Identities = 53/94 (56%), Positives = 68/94 (71%), Gaps = 2/94 (2%)

Query: 32  PNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           PN + +   C ZC L  N+ FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITSZA
Sbjct: 2   PNGZFTMQGCPZCKLKQNKYFSKLGAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITSZA 61

Query: 91  KCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
            CCVAK  +  T + +  V+NHTZCHCSTCYYHK
Sbjct: 62  TCCVAKAFTKATVMGNARVQNHTZCHCSTCYYHK 95

 sp|O46687|GLHA_MACRU GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|2738805 (AF017447)
           common glycoprotein hormone alpha-subunit [Trichosurus
           vulpecula] >gi|2738809 (AF017449) common glycoprotein
           hormone alpha-subunit [Macropus rufus]
           Length = 120
           
 Score =  121 bits (301), Expect = 2e-27
 Identities = 59/114 (51%), Positives = 71/114 (61%), Gaps = 2/114 (1%)

Query: 12  KAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAY 70
           K A V         +   S P+ +     C EC L  N+ FS+   P+YQCMGCCFSRAY
Sbjct: 6   KYAAVILATLSVFLHILHSFPDGEFIMQGCPECKLKENKYFSKLGAPIYQCMGCCFSRAY 65

Query: 71  PTPQTAIQTMAIPKNITSEAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           PTP  + +TM +PKNITSEA CCVAK  +  T + +  V NHTECHCSTCYYHK
Sbjct: 66  PTPARSKKTMLVPKNITSEATCCVAKAFTKATVMGNAKVENHTECHCSTCYYHK 119

 gi|3719213 (AF004520) gonadotrophin alpha subunit [Trichosurus vulpecula]
           Length = 120
           
 Score =  121 bits (301), Expect = 2e-27
 Identities = 59/114 (51%), Positives = 71/114 (61%), Gaps = 2/114 (1%)

Query: 12  KAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAY 70
           K A V         +   S P+ +     C EC L  N+ FS+   P+YQCMGCCFSRAY
Sbjct: 6   KYAAVILATLSVFLHILHSFPDGEFIMQGCPECKLKENKYFSKVGAPIYQCMGCCFSRAY 65

Query: 71  PTPQTAIQTMAIPKNITSEAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           PTP  + +TM +PKNITSEA CCVAK  +  T + +  V NHTECHCSTCYYHK
Sbjct: 66  PTPARSKKTMLVPKNITSEATCCVAKAFTKATVMGNAKVENHTECHCSTCYYHK 119

 sp|P11963|GLH2_RAT GLYCOPROTEIN HORMONES ALPHA CHAIN 2 PRECURSOR >gi|56583 (V01253)
           alpha subunit [Rattus norvegicus]
           Length = 120
           
 Score =  121 bits (300), Expect = 2e-27
 Identities = 57/96 (59%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ D     C EC L  N+ FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24  SLPDGDFIIQGCPECKLKENKYFSKLGAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           EA CCVAK  +  T + +  V NHTECHCSTCYYHK
Sbjct: 84  EATCCVAKAFTKATVMGNARVENHTECHCSTCYYHK 119

 sp|P12836|GLHA_MURCI GLYCOPROTEIN HORMONES ALPHA CHAIN (GONADOTROPIN ALPHA CHAIN)
           (GTH-ALPHA) (GTH-ALPHA) >gi|85477|pir||S07091
           glycoprotein hormones alpha chain - daggertooth pike
           conger >gi|226713|prf||1604195A gonadotropin alpha
           [Muraenesox cinereus]
           Length = 93
           
 Score =  121 bits (300), Expect = 2e-27
 Identities = 53/94 (56%), Positives = 70/94 (74%), Gaps = 3/94 (3%)

Query: 31  HPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSE 89
           +PN + S   C EC L  N+ FS+   P++QC+GCCFSRAYPTP  + +TM +PK+ITSE
Sbjct: 1   YPNNEISRGGCDECRLKDNKFFSKPSAPIFQCVGCCFSRAYPTPLRSKKTMLVPKDITSE 60

Query: 90  AKCCVAKHSYETKVDDITVRNHTECHCSTCYYHK 123
           A CCVA+    TK+D++ + NHT+CHCSTCYYHK
Sbjct: 61  ATCCVARE--VTKLDNMKLENHTDCHCSTCYYHK 92

 sp|P25329|GLHA_PHYCA GLYCOPROTEIN HORMONES ALPHA CHAIN
           Length = 96
           
 Score =  121 bits (300), Expect = 2e-27
 Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 2/94 (2%)

Query: 32  PNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           PN + +   C ZC L  N+ FS+   P+Y+CMGCCFSRAYPTP  + +TM +PKNITSZA
Sbjct: 2   PNGZFTMQGCPZCKLKQNKYFSKLGAPIYZCMGCCFSRAYPTPARSKKTMLVPKNITSZA 61

Query: 91  KCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
            CCVAK  +  T + +  V+NHTZCHCSTCYYHK
Sbjct: 62  TCCVAKAFTKATVMGNARVQNHTZCHCSTCYYHK 95

 sp|P01216|GLHA_MOUSE GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|69162|pir||TTMSA
           glycoprotein hormones alpha chain precursor - mouse
           >gi|54799 (V00852) thyrotropin [Mus musculus] >gi|202180
           (J00643) thyrotropin alpha subunit [Mus musculus]
           >gi|575520 (M22992) pituitary glycoprotein hormone [Mus
           musculus]
           Length = 120
           
 Score =  121 bits (300), Expect = 2e-27
 Identities = 57/96 (59%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ D     C EC L  N+ FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24  SLPDGDFIIQGCPECKLKENKYFSKLGAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           EA CCVAK  +  T + +  V NHTECHCSTCYYHK
Sbjct: 84  EATCCVAKAFTKATVMGNARVENHTECHCSTCYYHK 119

 sp|P51499|GLHA_CALJA GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|2134462|pir||G00021
           chorionic gonadotrophin alpha precursor - common
           marmoset >gi|606605 (U04446) chorionic gonadotropin
           alpha precursor [Callithrix jacchus]
           Length = 120
           
 Score =  121 bits (300), Expect = 2e-27
 Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ + ++  C EC L  N+ FSR   P+YQCMGCCFSRAYPTP  + +TM +PKN+TS
Sbjct: 24  SLPDGEFTAEECPECKLKENKYFSRLGSPIYQCMGCCFSRAYPTPLRSQKTMLVPKNVTS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           E+ CCVAK ++  T + +I V NHTECHCSTCY+HK
Sbjct: 84  ESTCCVAKAYTKATVMGNIRVENHTECHCSTCYHHK 119

 sp|P07474|GLHA_RABIT GLYCOPROTEIN HORMONES ALPHA CHAIN >gi|90081|pir||A05096
           glycoprotein hormones alpha chain - rabbit
           >gi|224666|prf||1110225A lutropin alpha [Oryctolagus
           cuniculus]
           Length = 96
           
 Score =  120 bits (299), Expect = 3e-27
 Identities = 55/94 (58%), Positives = 67/94 (70%), Gaps = 2/94 (2%)

Query: 32  PNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           P+ + +   C EC L  N+ FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITSEA
Sbjct: 2   PDGEFAMQGCPECKLKENKYFSKLGAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITSEA 61

Query: 91  KCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
            CCVAK  +  T + +  V NHTECHCSTCYYHK
Sbjct: 62  TCCVAKAFTKATVMGNAKVENHTECHCSTCYYHK 95

 sp|P11962|GLH1_RAT GLYCOPROTEIN HORMONES ALPHA CHAIN 1 PRECURSOR >gi|69161|pir||TTRTA
           glycoprotein hormones alpha chain precursor - rat
           >gi|56580 (V01252) alpha subunit [Rattus norvegicus]
           >gi|220842|gnl|PID|d1000908 (D00575) glycoprotein
           hormone alpha-subunit precursor [Rattus norvegicus]
           >gi|228703|prf||1808353A
           lutropin/follitropin/thyrotropin:SUBUNIT=alpha [Rattus
           norvegicus]
           Length = 120
           
 Score =  120 bits (297), Expect = 5e-27
 Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ D     C EC L  N+ FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24  SLPDGDLIIQGCPECKLKENKYFSKLGAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           EA CCVAK  +  T + +  V NHT+CHCSTCYYHK
Sbjct: 84  EATCCVAKSFTKATVMGNARVENHTDCHCSTCYYHK 119

 prf||731693A intestinal cell stimulating hormone [Ovis aries]
           Length = 96
           
 Score =  119 bits (295), Expect = 8e-27
 Identities = 54/94 (57%), Positives = 67/94 (70%), Gaps = 2/94 (2%)

Query: 32  PNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           P+ + +   C EC L  N+ FS+ D P+YQCMGCCFSRAYPTP  + +TM +PKNITSEA
Sbjct: 2   PDGEFTMQGCPECKLKENKYFSKPDAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITSEA 61

Query: 91  KCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
            CCVAK  +  T + ++ V NHTECH  TCYYHK
Sbjct: 62  TCCVAKAFTKATVMGNVRVENHTECHSCTCYYHK 95

 gi|206111 (J00757) glycoprotein hormone alpha subunit [Rattus norvegicus]
           Length = 120
           
 Score =  118 bits (294), Expect = 1e-26
 Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 30  SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
           S P+ D     C EC L  N+ FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24  SLPDGDLIIQGCPECKLKENKYFSKLGAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89  EAKCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
           +A CCVAK  +  T + +  V NHT+CHCSTCYYHK
Sbjct: 84  QATCCVAKSFTKATVMGNARVENHTDCHCSTCYYHK 119

 sp|P37036|GLHA_BALAC GLYCOPROTEIN HORMONES ALPHA CHAIN >gi|320145|pir||PN0138
           glycoprotein hormones alpha chain - minke whale
           Length = 96
           
 Score =  118 bits (294), Expect = 1e-26
 Identities = 50/94 (53%), Positives = 67/94 (71%), Gaps = 2/94 (2%)

Query: 32  PNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           P+ + +   C ZC L  ++ FS+   P+Y+CMGCCFSRAYPTP  + +TM +PKNITSZA
Sbjct: 2   PBGZFTMZGCPZCKLKZBKYFSKLGAPIYZCMGCCFSRAYPTPARSKKTMLVPKNITSZA 61

Query: 91  KCCVAK-HSYETKVDDITVRNHTECHCSTCYYHK 123
            CCVAK  +  T + B  V NHTZCHCSTCYYHK
Sbjct: 62  TCCVAKAFTKATVMGBARVZNHTZCHCSTCYYHK 95

 gnl|PID|e1248979 (Y16326) luteinizing hormone alpha subunit [Equus burchelli]
           Length = 120
           
 Score =  118 bits (294), Expect = 1e-26
 Identities = 56/115 (48%), Positives = 75/115 (64%), Gaps = 2/115 (1%)

Query: 12  KAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAY 70
           K A V         +   S P+ + ++  C EC L +N+ FS+   P+YQCMGCCFSRAY
Sbjct: 6   KHAAVILATLSVFLHILHSFPDGEFTTQDCPECKLKVNKYFSKLGVPIYQCMGCCFSRAY 65

Query: 71  PTPQTAIQTMAIPKNITSEAKCCVAKHSYE-TKVDDITVRNHTECHCSTCYYHKL 124
           PTP  + +TM +PKNITSEA CCVAK     T + +I + NHT+C+CSTCY+HK+
Sbjct: 66  PTPARSRKTMLVPKNITSEATCCVAKAFIRVTLMGNIRLENHTQCYCSTCYHHKI 120

 sp|Q28365|GLHA_EQUAS GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|1082948|pir||S53062
           glycoprotein hormones alpha chain precursor - donkey
           >gi|732678 (X85170) glycoprotein hormone alpha subunit
           [Equus asinus]
           Length = 120
           
 Score =  117 bits (291), Expect = 2e-26
 Identities = 56/115 (48%), Positives = 74/115 (63%), Gaps = 2/115 (1%)

Query: 12  KAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAY 70
           K A V         +   S P+ + ++  C EC L  N+ FS+   P+YQCMGCCFSRAY
Sbjct: 6   KHAAVILATLSVFLHILHSFPDGEFTTQDCPECKLKKNKYFSKLGVPIYQCMGCCFSRAY 65

Query: 71  PTPQTAIQTMAIPKNITSEAKCCVAKHSYE-TKVDDITVRNHTECHCSTCYYHKL 124
           PTP  + +TM +PKNITSEA CCVAK     T + +I + NHT+C+CSTCY+HK+
Sbjct: 66  PTPARSKKTMLVPKNITSEATCCVAKAFIRVTLMGNIRLENHTQCYCSTCYHHKI 120

 prf||760571A thyrotropin alpha [Sus scrofa domestica]
           Length = 90
           
 Score =  116 bits (289), Expect = 4e-26
 Identities = 49/85 (57%), Positives = 63/85 (73%), Gaps = 2/85 (2%)

Query: 41  CGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEAKCCVAK-HS 98
           C ZC L  ++ FS+   P+Y+CMGCCFSRAYPTP  + +TM +PKNITSZA CCVAK  +
Sbjct: 5   CPZCKLKZBKYFSKLGAPIYZCMGCCFSRAYPTPARSKKTMLVPKNITSZATCCVAKAFT 64

Query: 99  YETKVDDITVRNHTECHCSTCYYHK 123
             T + B  V NHTZCHCSTCYYHK
Sbjct: 65  KATVMGBARVZNHTZCHCSTCYYHK 89

 gnl|PID|d1013799 (D86552) gonadotropin alpha subunit [Carassius auratus]
           Length = 108
           
 Score =  115 bits (285), Expect = 1e-25
 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 1/107 (0%)

Query: 14  AGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPT 72
           AG S        +    +P    ++  C EC L  N +FS+   P+YQCMGCCFSRAYPT
Sbjct: 2   AGASILLFLMLIHLGQLYPRNYMNNFGCEECKLKENNIFSKPGAPVYQCMGCCFSRAYPT 61

Query: 73  PQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTC 119
           P  + +TM +PK+ITSEA CCVAK      VDD+ + NHT+CHCSTC
Sbjct: 62  PLRSKKTMLVPKDITSEATCCVAKEVKRVLVDDVKLVNHTDCHCSTC 108

 sp|P22762|GLHA_MACMU GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|105016|pir||A39555
           glycoprotein hormones alpha chain precursor - rhesus
           macaque
           Length = 120
           
 Score =  114 bits (282), Expect = 3e-25
 Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 2/114 (1%)

Query: 12  KAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAY 70
           K A V         +   S P+ + +   C EC    N+ FS+   P+YQCMGCCFSRAY
Sbjct: 6   KYAAVILVTLSVFLHILHSFPDGEFTMQDCPECKPRENKFFSKPGAPIYQCMGCCFSRAY 65

Query: 71  PTPQTAIQTMAIPKNITSEAKCCVAKHSYETKV-DDITVRNHTECHCSTCYYHK 123
           PTP  + +TM + KN+TSE+ CCVAK      V   + V NHTECHCSTCYYHK
Sbjct: 66  PTPVRSKKTMLVQKNVTSESTCCVAKSLTRVMVMGSVRVENHTECHCSTCYYHK 119

 gnl|PID|d1013798 (D86551) gonadotropin alpha subunit [Carassius auratus]
           Length = 107
           
 Score =  113 bits (281), Expect = 4e-25
 Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 2/107 (1%)

Query: 14  AGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPT 72
           AG S        +    +P  D +   C EC L  N +FS+   P+YQCMGCCFSRAYPT
Sbjct: 2   AGASILLLLMLIHLGQLYPRNDMN-FGCEECKLKENNIFSKPGAPVYQCMGCCFSRAYPT 60

Query: 73  PQTAIQTMAIPKNITSEAKCCVAKHSYETKVDDITVRNHTECHCSTC 119
           P  + +TM +PKNITSEA CCVAK      V+D+ + NHT+CHCSTC
Sbjct: 61  PLRSKKTMLVPKNITSEATCCVAKEVKRVLVNDVRLVNHTDCHCSTC 107

 sp|P80051|GLHA_RANCA GLYCOPROTEIN HORMONES ALPHA CHAIN >gi|104297|pir||S20287 lutropin
           alpha chain - bullfrog >gi|243122|bbs|76320 lutropin
           alpha subunit, follitropin alpha subunit, LH alpha
           subunit, FSH alpha subunit [Rana catesbeiana=bullfrogs,
           Peptide, 97 aa] >gi|228560|prf||1806207A
           lutropin/follitropin:SUBUNIT=alpha [Rana catesbeiana]
           Length = 97
           
 Score =  111 bits (276), Expect = 1e-24
 Identities = 52/95 (54%), Positives = 64/95 (66%), Gaps = 3/95 (3%)

Query: 32  PNFDSSSMACGECSLGLNRLFSRDR--PLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSE 89
           P+ +  +  C EC L  N  FS      +YQC GCC+SRAYPTP  + +TM +PKNITSE
Sbjct: 2   PDDNFLTPGCPECRLKENLRFSNMGIGRIYQCSGCCYSRAYPTPMRSKKTMLVPKNITSE 61

Query: 90  AKCCVAKHSYE-TKVDDITVRNHTECHCSTCYYHK 123
           AKCCVAK  Y  T +D++ + NHT CHCSTC YHK
Sbjct: 62  AKCCVAKTQYRVTVMDNVKIENHTACHCSTCLYHK 96

 sp|P01220|GLHA_HORSE GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR
           >gi|1777301|gnl|PID|d1019811 (AB000200) equine chorionic
           gonadotropin alpha-subunit [Equus caballus]
           Length = 120
           
 Score =  111 bits (275), Expect = 2e-24
 Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 2/115 (1%)

Query: 12  KAAGVSXXXXXXXXNAADSHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAY 70
           K A V         +   S P+ + ++  C EC L  N+ F +   P+YQC GCCFSRAY
Sbjct: 6   KHAAVILATLSVFLHILHSFPDGEFTTQDCPECKLRENKYFFKLGVPIYQCKGCCFSRAY 65

Query: 71  PTPQTAIQTMAIPKNITSEAKCCVAKHSYE-TKVDDITVRNHTECHCSTCYYHKL 124
           PTP  + +TM +PKNITSE+ CCVAK     T + +I + NHT+C+CSTCY+HK+
Sbjct: 66  PTPARSRKTMLVPKNITSESTCCVAKAFIRVTVMGNIKLENHTQCYCSTCYHHKI 120

 pir||TTHOA glycoprotein hormones alpha chain - horse
           Length = 96
           
 Score =  109 bits (270), Expect = 7e-24
 Identities = 49/95 (51%), Positives = 67/95 (69%), Gaps = 2/95 (2%)

Query: 32  PNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEA 90
           P+ + ++  C EC L  N+ F +   P+YQC GCCFSRAYPTP  + +TM +PKNITSE+
Sbjct: 2   PDGEFTTQDCPECKLRENKYFFKLGVPIYQCKGCCFSRAYPTPARSRKTMLVPKNITSES 61

Query: 91  KCCVAKHSYE-TKVDDITVRNHTECHCSTCYYHKL 124
            CCVAK     T + +I + NHT+C+CSTCY+HK+
Sbjct: 62  TCCVAKAFIRVTVMGNIKLENHTQCYCSTCYHHKI 96

 sp|P01215|GLHA_HUMAN GLYCOPROTEIN HORMONES ALPHA CHAIN PRECURSOR >gi|69160|pir||TTHUAP
           glycoprotein hormones alpha chain precursor - human
           >gi|31869 (V00518) chorionic gonadotropin [Homo sapiens]
           >gi|183319 (J00152) glycoprotein alpha subunit [Homo
           sapiens] >gi|546845|bbs|148796 (S70585)
           thyroid-stimulating hormone alpha subunit, TSH alpha
           [human, Peptide, 116 aa] [Homo sapiens] >gi|669156
           (V00485) chorionic gonadotropin [Homo sapiens]
           >gi|223139|prf||0511548A chorionic gonadotropin alpha
           [Homo sapiens]
           Length = 116
           
 Score =  107 bits (265), Expect = 3e-23
 Identities = 49/85 (57%), Positives = 60/85 (69%), Gaps = 2/85 (2%)

Query: 41  CGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEAKCCVAK-HS 98
           C EC+L  N  FS+   P+ QCMGCCFSRAYPTP  + +TM + KN+TSE+ CCVAK ++
Sbjct: 31  CPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKKTMLVQKNVTSESTCCVAKSYN 90

Query: 99  YETKVDDITVRNHTECHCSTCYYHK 123
             T +    V NHT CHCSTCYYHK
Sbjct: 91  RVTVMGGFKVENHTACHCSTCYYHK 115

 pdb|1HCN|A Homo sapiens
           Length = 92
           
 Score =  107 bits (265), Expect = 3e-23
 Identities = 49/85 (57%), Positives = 60/85 (69%), Gaps = 2/85 (2%)

Query: 41  CGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEAKCCVAK-HS 98
           C EC+L  N  FS+   P+ QCMGCCFSRAYPTP  + +TM + KN+TSE+ CCVAK ++
Sbjct: 7   CPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKKTMLVQKNVTSESTCCVAKSYN 66

Query: 99  YETKVDDITVRNHTECHCSTCYYHK 123
             T +    V NHT CHCSTCYYHK
Sbjct: 67  RVTVMGGFKVENHTACHCSTCYYHK 91

 gi|602448 (M27462) gonadotropin alpha 1subunit [Equus caballus]
           Length = 93
           
 Score =  107 bits (265), Expect = 3e-23
 Identities = 48/86 (55%), Positives = 62/86 (71%), Gaps = 2/86 (2%)

Query: 41  CGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEAKCCVAKHSY 99
           C EC L  N+ F +   P+YQC GCCFSRAYPTP  + +TM +PKNITSE+ CCVAK   
Sbjct: 8   CPECKLRENKYFFKLGVPIYQCKGCCFSRAYPTPARSRKTMLVPKNITSESTCCVAKAFI 67

Query: 100 E-TKVDDITVRNHTECHCSTCYYHKL 124
             T + +I + NHT+C+CSTCY+HK+
Sbjct: 68  RVTVMGNIKLENHTQCYCSTCYHHKI 93

 pdb|1HRP|A Homo sapiens
           Length = 92
           
 Score =  107 bits (265), Expect = 3e-23
 Identities = 49/85 (57%), Positives = 60/85 (69%), Gaps = 2/85 (2%)

Query: 41  CGECSLGLNRLFSRD-RPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITSEAKCCVAK-HS 98
           C EC+L  N  FS+   P+ QCMGCCFSRAYPTP  + +TM + KN+TSE+ CCVAK ++
Sbjct: 7   CPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKKTMLVQKNVTSESTCCVAKSYN 66

Query: 99  YETKVDDITVRNHTECHCSTCYYHK 123
             T +    V NHT CHCSTCYYHK
Sbjct: 67  RVTVMGGFKVENHTACHCSTCYYHK 91

 gi|204470 (M25544) pituitary hormone alpha subunit [Rattus norvegicus]
          Length = 95
          
 Score = 87.8 bits (214), Expect = 3e-17
 Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)

Query: 30 SHPNFDSSSMACGECSLGLNRLFSR-DRPLYQCMGCCFSRAYPTPQTAIQTMAIPKNITS 88
          S P+ D     C EC L  N+ FS+   P+YQCMGCCFSRAYPTP  + +TM +PKNITS
Sbjct: 24 SLPDGDLIIQGCPECKLKENKYFSKLGAPIYQCMGCCFSRAYPTPARSKKTMLVPKNITS 83

Query: 89 EAKCCVAK 96
          EA CCVAK
Sbjct: 84 EATCCVAK 91


CPU time:     0.56 user secs.	    0.09 sys. secs	    0.65 total secs.

  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Jan 5, 1999  6:53 PM
  Number of letters in database: 105,452,721
  Number of sequences in database:  345,453
  
Lambda     K      H
   0.323    0.130     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 7.29e-304 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22318411
Number of Sequences: 345453
Number of extensions: 724604
Number of successful extensions: 2501
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2368
Number of HSP's gapped (non-prelim): 60
length of query: 125
length of database: 105452721
effective HSP length: 49
effective length of query: 76
effective length of database: 88525524
effective search space: 6727939824
effective search space used: 6727939824
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)