Activin/Inhibin Beta B Protein Alignment (mammal, bird, amphibian)
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Activin/Inhibin Beta B Protein Alignment (mammal, bird, amphibian) CLUSTAL W (1.81) Multiple Sequence Alignments Sequence format is Pearson Sequence 1: Human gi|9257225|ref|NP_002184.1| 407 aa Sequence 2: Rat gi|7438529|pir||B41398 411 aa Sequence 3: Cow gi|563753|gb|AAB60628.1| 408 aa Sequence 4: Sheep gi|227545|prf||1706327A 408 aa Sequence 5: Pig gi|2006|emb|CAA27021.1| 349 aa Sequence 6: Mouse gi|2507453|sp|Q04999| 255 aa Sequence 7: Chicken gi|1429377|emb|CAA96248.1| 391 aa Sequence 8: Xenopus gi|386028|gb|AAB26863.1| 370 aa
Start of Pairwise alignments Aligning... Sequences (2:3) Aligned. Score: 94 Sequences (4:5) Aligned. Score: 93 Sequences (4:6) Aligned. Score: 93 Sequences (1:2) Aligned. Score: 97 Sequences (2:4) Aligned. Score: 93 Sequences (3:4) Aligned. Score: 97 Sequences (4:7) Aligned. Score: 82 Sequences (2:5) Aligned. Score: 94 Sequences (1:3) Aligned. Score: 96 Sequences (3:5) Aligned. Score: 94 Sequences (4:8) Aligned. Score: 71 Sequences (3:6) Aligned. Score: 94 Sequences (1:4) Aligned. Score: 95 Sequences (2:6) Aligned. Score: 100 Sequences (5:6) Aligned. Score: 95 Sequences (5:7) Aligned. Score: 87 Sequences (2:7) Aligned. Score: 84 Sequences (5:8) Aligned. Score: 73 Sequences (6:7) Aligned. Score: 89 Sequences (6:8) Aligned. Score: 79 Sequences (2:8) Aligned. Score: 72 Sequences (7:8) Aligned. Score: 75 Sequences (1:5) Aligned. Score: 95 Sequences (3:7) Aligned. Score: 82 Sequences (1:6) Aligned. Score: 97 Sequences (3:8) Aligned. Score: 71 Sequences (1:7) Aligned. Score: 84 Sequences (1:8) Aligned. Score: 73 Guide tree file created: [/net/nfs0/vol1/production/w3nobody/tmp/999999.921078-485031.dnd] Start of Multiple Alignment There are 7 groups Aligning... Group 1: Sequences: 2 Score:8880 Group 2: Sequences: 2 Score:8853 Group 3: Sequences: 4 Score:8713 Group 4: Sequences: 5 Score:7451 Group 5: Sequences: 6 Score:5536 Group 6: Sequences: 7 Score:7717 Group 7: Sequences: 8 Score:6945 Alignment Score 55919 CLUSTAL-Alignment file created [/net/nfs0/vol1/production/w3nobody/tmp/999999.921078-485031.aln]
( ( Human:0.00592, Rat:0.01619) :0.00385, ( Cow:0.01073, Sheep:0.01623) :0.02375, ( Pig:0.02415, ( Mouse:-0.01320, ( Chicken:0.06370, Xenopus:0.17955) :0.04452) :0.01837) :0.00651);
Activin/Inhibin Beta B Protein Alignment (mammal, bird, amphibian)
CLUSTAL W (1.81) multiple sequence alignment Human MDGLPGRALGAACLLLLAAGWLGPEAWGSPTPPPTPAAP-PPPPPPGAPGGSQDTCTSCG 59 Rat MDGLPGRALGAACLLLLAAGWLGPEAWGSPTPPPSPAAP-PPPPPPGAPGGSQDTCTSCG 59 Cow MDGLPGRALGAACLLMLAVGSLGPGVWGSPTPPPLPAAPQPPPPPPGAPGGSQDTCTSCG 60 Sheep MDGLPGRALGAACLVMLAVGWLGPGVWGSPTPPPSPAAPQPPPPPPGAPGGAQDTCTSCG 60 Pig --------------------------------------------------------RAAG 4 Mouse ------------------------------------------------------------ Chicken MDGAARRGVLAA---LLACGLLLLGAAATPTPPPAGSSP-------------QDTCTSCG 44 Xenopus -----------MALLLLPLLLAGLARTCAPSPTPEPG------------------CPSCH 31 Human G----FRRPEELGRVDGDFLEAVKRHILSRLQMRGRPNITHAVPKAAMVTALRKLHAGKV 115 Rat GGGGGFRRPEELGRVDGDFLEAVKRHILSRLQLRGRPNITHAVPKAAMVTALRKLHAGKV 119 Cow G----FRRPEELGRVDGDFLEAVKRHILNRLQMRGRPNITHAVPKAAMVTALRKLHAGKV 116 Sheep G----FRRPEELGRVDGDFLEAVKRHILSRLQMRGRPNITHAVPKAAMVTALRKLHAGKV 116 Pig -------AEEELGRLDGDFLEAVKRHILNRLQMRGRPNITHAVPKAAMVTALRKLHAGKV 57 Mouse ------------------------------------------------------------ Chicken -----FRRPEEPGKVDGDFLEAVKRHILSRLQMRDRPNITHAVPKAAMVTALRKLHAGKV 99 Xenopus P-------PMEP-----EMLEAVKRHILTLLHMQDRPNITHMVPRAAMVSALRKLHAGRV 79 Human REDGRVEIPHLDGHASPG-ADGQERVSEIISFAETDGLASSRVRLYFFISNEGNQNLFVV 174 Rat REDGRVEIPHLDGHASPG-ADGQERVSEIISFAETDGLASSRVRLYFFVSNEGNQNLFVV 178 Cow REDGRVEIPHLDGHASPG-ADGQERVSEIISFAETDGLASSRVRLYFFISNEGNQNLFVV 175 Sheep REDGRVEIPHLDGHASPG-ADGPERVSEIISFAETDGLASSRVRLYFFISNEGNQNLFVV 175 Pig REDGRVEIPHLDGHASPG-ADGQERVSEIISFAETDGLASSRVRLYFFISNEGNQNLFVV 116 Mouse --------------------------------------ASSRVRLYFFVSNEGNQNLFVV 22 Chicken REDGRVEIPSLDGQASAG-PPAHDPVSEIISFAETDDLASSRVRLYFFISNEGNQNLFVV 158 Xenopus REDGNLEIPDLDGHSLPPPGHSTENSAEIITFAETDDVTASRVRLSFTIANEGNQNLFVF 139 ::***** * ::*********. Human QASLWLYLKLLPYVLEKGSRRKVRVKVYFQEQGHGDRWNMVEKRVDLKRSGWHTFPLTEA 234 Rat QASLWLYLKLLPYVLEKGSRRKVRVKVYFQEQGHGDRWNVVEKKVDLKRSGWHTFPITEA 238 Cow QASLWLYLKLLPYVLEKGGRRKVRVKVYGQEQGPGDRWAAVEKRVDLKRSGWHTFPLTEP 235 Sheep QASLWLYLKLLPYVLEKGGRRKVRVKVYFQEQGPGDRWAAVEKRVDLKRSGWHTFPLTEP 235 Pig QASLWLYLKLLPYVLEKGSRRKVRVKVYFQEPGHGDRWDVVEKRVDLKRSGWHTLPLTEA 176 Mouse QASLWLYLKLLPYVLEKGSRRKVRVKVYFQEQGHGDRWNVVEKKVDLKRSGWHTFPITEA 82 Chicken QASLWLYLKLLPYVLEKGSRRKVRVKVYFQDPDTSNKWNVVEKKVDLKRSGWHTFPMTEA 218 Xenopus QSNLWLYLK-LPEVMDK-SRRKIRIKVHFQDAFNPDKMNMVEKKVDIRRSGWHTFPLTEA 197 *:.****** ** *::* .***:*:**: *: :: ***:**::******:*:**. Human IQALFERGERRLNLDVQCDSCQELAVVPVFVDPGEESHRPFVVVQARLGDSRHRIRKRGL 294 Rat IQALFERGERRLNLDVQCDSCQELAVVPVFVDPGEESHRPFVVVQARLGDSRHRIRKRGL 298 Cow IQALFSRGERRLSLDVQCDSCRELAVVPVFVDPGEESHRPFVVVQARLGDSRHRIRKRGL 295 Sheep IQALFSRGERRLSLDVQCDGCRELAVVPVFVDPGEESHRPFVVVQERLGDSRHRIRKRGL 295 Pig IQALFERGERRLNLDVQCDGCQELAVVPVFVDPGEESHRPFVVVQARLGDSRHRIRKRGL 236 Mouse IQALFERGERRLNLDVQCDSCQELAVVPVFVDPGEESHRPFVVVQARLGDSRHRIRKRGL 142 Chicken IQALFERGERRLNLDVQCEGCEEYSVLPIYVDPGEESHRPFLVVQARLADNKHRIRKRGL 278 Xenopus IQSLFEEGERRLNLEVQCDGCGEYSVIPVYVDPGEESHRPFLVVHARLADNKHRIRKRGL 257 **:**..*****.*:***:.* * :*:*::***********:**: **.*.:******** Human ECDGRTNLCCRQQFFIDFRLIGWNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAV 354 Rat ECDGRTSLCCRQQFFIDFRLIGWNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAV 358 Cow ECDGRTNLCCRQQFFIDFRLIGWNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAV 355 Sheep ECDGRTSLCCRQQFFIDFRLIGWNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAV 355 Pig ECDGRTNLCCRQQFFIDFRLIGWSDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAV 296 Mouse ECDGRTSLCCRQQFFIDFRLIGWNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAV 202 Chicken ECDGRTNLCCRQQFYIDFRLIGWNDWIIAPSGYYGNYCEGSCPAYLAGVPGSASSFHTAV 338 Xenopus ECDGHTNLCCRQQFYIDFRLIGWNDWIIAPAGYYGNYCEGSCPAYLAGVPGSASSFHTAV 317 ****:*.*******:********.******:***************************** Human VNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECGCA 407 Rat VNQYRMRGLNPGPVNSCCIPTKLSSMSMLYFDDEYNIVKRDVPNMIVEECGCA 411 Cow VNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECGCA 408 Sheep VNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECACA 408 Pig VNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECGCA 349 Mouse VNQYRMRGLNPGPVNSCCIPTKLSSMSMLYFDDEYNIVKRDVPNMIVEECGCA 255 Chicken VNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECGCA 391 Xenopus VNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVDECGCA 370 ************.***********:**********************:**.**