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Polycomb Pc2-like Nucleotide Alignment

(Human, Mouse, Chicken and Frog)

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Your ClustalW Results:

Use JalView:

Pairwise Scores:




 CLUSTAL W (1.81) Multiple Sequence Alignments



Sequence format is Pearson
Sequence 1: Human gi|2317722| Homo sapiens Polycomb 2 homolog (hPc2) mRNA, complete cds  1867 bp
Sequence 2: Mouse gi|2781391| Mus musculus transcriptional repressor Mpc2 mRNA, complete cds  2542 bp
Sequence 3: Chicken gi|3649786| Gallus gallus mRNA for chromobox protein (CHCB3), complete cds  2118 bp
Sequence 4: Frog gi|1086555|gb|U39929.1|XLU39929 Xenopus laevis XPolycomb mRNA, complete cds  2417 bp
Start of Pairwise alignments
Aligning...
Sequences (3:4) Aligned. Score:  45
Sequences (1:2) Aligned. Score:  81
Sequences (2:3) Aligned. Score:  73
Sequences (1:3) Aligned. Score:  66
Sequences (1:4) Aligned. Score:  30
Sequences (2:4) Aligned. Score:  41
Guide tree        file created:   [/net/nfs0/vol1/production/w3nobody/tmp/635918.142146-29166.dnd]
Start of Multiple Alignment
There are 3 groups
Aligning...
Group 1: Sequences:   2      Score:29284
Group 2: Sequences:   3      Score:24145
Group 3: Sequences:   4      Score:20957
Alignment Score 46335
CLUSTAL-Alignment file created  [/net/nfs0/vol1/production/w3nobody/tmp/635918.142146-29166.aln]

Your Multiple Sequence Alignment:

635918.142146-29166.aln


Polycomb Pc2-like Nucleotide Alignment
CLUSTAL W (1.81) multiple sequence alignment


Human           GGGCGAGCGCGACGCGGGAGCCGGGGCGGCGCGGGCAGCGCGGGCCGGCCGGGCTGTGCG 60
Mouse           ----------------------------------------GAATTCAAGCCGGCGGCGGG 20
Chicken         -------------------------------------------------CGCGCAGTGTC 11
Frog            ------------------------------------------------------------
                                                                            

Human           GGGCGAGCGGCGGCGCGGCGGGGGCCTTCGGCCGGGGCGGCAGCTGGGCGCCGGCGGGAG 120
Mouse           GGCCGGGC----GCGTGGCGAGGTCCA-CGCGCAGGATCGTATCGGGGCGCCGGCGGGAG 75
Chicken         TGTCGGTT----CGGCGGCGGGAGCTGCCG---GAGCCCGGATCCCGCT--CGGCCGCAG 62
Frog            ------------------------------------------------------------
                                                                  Primer                      
                                                                         M   1
Human           CTAGCAGCGTCTGCAGCCGCGCCCG--GCCAGCCCCC--------TCCGGCTCGGC-ATG 169
Mouse           CTAGCTGTGTCTGCAGCCGCGCCGGCCGCTTGCGCCCCTGAGCGCTCGGGTTCGGCCATG 135
Chicken         CGGGCAGCGCGGACGCCCG-GCTCG------GCCCTTC-------CCGAGCCCAGC-ATG 107
Frog            ------------------------AGCTCCAGCCCCTG-----ACTGCAGGGGAAC-ATG 30
                                               ** *              *     * ***
                
                E  L  P  A  V  G  E  H  V  F  A  V  E  S  I  E  K  K  R  I   21               
Human           GAGCTGCCAGCTGTTGGCGAGCACGTCTTCGCGGTGGAGAGCATCGAGAAGAAGCGGATC 229
Mouse           GAGCTGCCAGCTGTTGGCGAGCACGTCTTCGCGGTGGAGAGCATCGAAAAGAAGCGGATA 195
Chicken         GAGCTGCCGGCGGTGGGCGAGCACGTCTTCGCCGTGGAGAGCATCGAGAAGAAGCGGATC 167
Frog            GAGCTGCCCGCCGTTGGAGAACATGTGTTCGCAGTTGAAAGCATCGAAAAGAAGCGGATC 90
                ******** ** ** ** ** ** ** ***** ** ** ******** *********** 
                R  K  G  R  V  E  Y  L  V  K  W  R  G  W  S  P  K  Y  N  T   41             
Human           CGCAAGGGCAGAGTGGAGTATCTGGTGAAATGGAGAGGCTGGTCGCCCAAATATAACACG 289
Mouse           CGCAAGGGCAGAGTGGAGTATCTGGTGAAATGGAGAGGCTGGTCCCCCAAATATAACACG 255
Chicken         CGAAAGGGCAGAGTGGAGTACCTGGTGAAATGGAGGGGATGGTCGCCCAAGTATAACACG 227
Frog            CGCAAGGGTCGTGTGGAATACCTTGTGAAGTGGAGAGGCTGGTCCTCAAAATATAATACA 150
                ** *****  * ***** ** ** ***** ***** ** *****  * ** ***** ** 
                W  E  P  E  E  N  I  L  D  P  R  L  L  I  A  F  Q  N  R  E   61
Human           TGGGAACCGGAGGAGAACATCCTGGACCCCAGGCTGCTGATCGCCTTCCAGAACAGGGAA 349
Mouse           TGGGAACCAGAGGAGAACATCTTGGATCCCCGGCTGCTGATCGCCTTCCAGAACAGGGAA 315
Chicken         TGGGAGCCGGAGGAGAACATCCTGGACCCCCGGCTGCTCATCGCCTTCCAGAACAGGGAG 287
Frog            TGGGAGCCAGAGGAAAATATTTTGGATCCAAGGCTATTGGTTGCGTTTCAGAACAGGGAA 210
                ***** ** ***** ** **  **** **  ****  *  * ** ** *********** 
                R  Q  E  Q  L  M  G  Y  R  K  R  G  P  K  P  K  P  L  V  V   81
Human           CGGCAGGAGCAGCTGATGGGATATCGGAAGAGAGGGCCGAAGCCCAAACCGCTAGTGGTG 409
Mouse           AGGCAGGAGCAGCTGATGGGATATCGCAAGAGAGGGCCCAAGCCAAACCCGCTGGTGGTG 375
Chicken         CGGCAGGAGCAGCTGATGGGATACCGCAAGCGGGGCCCCAAGCCGAAGCCGCTCGTCGTG 347
Frog            AGACAAGAGCAGATCATGGGATACAGAAAACGTGGCCCCAAGCCAAAAAATAATCTTGTT 270
                 * ** ****** * ********  * **  * ** ** ***** **        * ** 
                Q  V  P  T  F  A  R  R  S  N  V  L  T  G  L  Q  D  S  S  T   101
Human           CAGGTGCCTACCTTTGCCCGTCGTTCCAATGTCCTGACCGGCCTCCAGGACTCCTCCACT 469
Mouse           CAGGTGCCCACCTTTGCCCGACGCTCCAATGTTCTGACTGGGCTTCAAGACTCCTCCGCT 435
Chicken         CAGCTGCCCTCCTTCGCCCGCCGCTCCAACATCCTGACGGGGCTGCAGGACCCCACCGTG 407
Frog            TCTATGCCATCGTTTGCTCGCCGCTCGAATGTTTTGAGTGGACTTCATGATTCCTCTGGT 330
                    ****  * ** ** ** ** ** **  *  ***  ** ** ** **  ** *    
                D  N  R  A  K  L  D  L  G  A  Q  G  K  G  Q  G  H  Q  Y  E   121
Human           GACAACCGTGCCAAGCTGGATTTGGGCGCGCAGGGGAAGGGCCAGGGGCATCAGTACGAG 529
Mouse           GACAACCGTGCCAAGCTGGAGTTGGGCACACAGGGCAAGGGCCAGGGGCACCAGTATGAG 495
Chicken         GACACCCGGCCGAAGCTGGACCTCGGCTCCTCCGGCAAGAGCCAGCAGCACCAGTATGAG 467
Frog            GAAAACCGAACCAAGTTGGACCTAGGGCCTATTCCCAAGAGCCA------TCAATATCAG 384
                ** * ***  * *** ****  * **  *       *** ****       ** **  **
                L  N  S  K  K  H  H  Q  Y  Q  P  H  S  K  E  G        K  P   139
Human           CTCAACAGCAAGAAGCACCACCAGTACCAGCCGCACAGCAAGGAGGGG------AAGCC- 582
Mouse           CTCAACAGCAAGAAGCACCATCAGTACCAGCCACATAGCAAGGAGAGGTCCGGTAAGCCG 555
Chicken         CTCAACAGCAAGAAGCACCACCAGTACCAGCCCAACGGCAAGGAGAGCGGCGTGAAGCA- 526
Frog            CTAAACAGTAAAAAACACCACCAGTACCAGCCTAGTGGCAAGGACCACAATGAAAAGCA- 443
                ** ***** ** ** ***** ***********     *******          ****  
                 R  P  P  G  K  S  G  K  Y  Y  Y  Q  L  N  S  K  K  H  H  P  159
Human           CCGGCCGCCGGGCAAGAGCGGCAAGTACTACTACCAGCTCAACAGCAAGAAGCACCACCC 642
Mouse           CCCCCCGCCAGG-AAGAGCGGCAAGTATTATTATCAGCTAAATAGCAAAAAGCACCACCC 614
Chicken         CCAGTCCCACAGCAAG---GGCAAGTACTACTACCAGCTCAACAGCAAGAAGCACCACCA 583
Frog            TCATTCCAGTAACAAG---AAAAAATACTATTATCAGCTCAATAGCAAAAAACATCATCA 500
                 *   *       ***      ** ** ** ** ***** ** ***** ** ** ** * 
                 Y  Q  P  D  P  K  M  Y  D  L  Q  Y  Q  G  G       H  K  E   177
Human           CTACCAGCCCGACCCCAAAATGTACGACCTGCAGTACCAGGGCG-----GCCACAAGGAG 697
Mouse           CTACCAGCCAGACCCCAAAATGTACGACCTGCAGTACCAGGGCG-----GCCACAAGGAG 669
Chicken         CTACCAGCCTGACCCCAAGATGTACGAGCCCCACTACCATCCCA-----GCGGCAAGGAG 638
Frog            CTACCAACCGGATCCTAAGCTGTATGAACAGTA-TACCATTGAAAAAGAGTCTCAAATAA 559
                ****** ** ** ** **  **** ** *   * *****          *   ***  * 
                A  P  S   P  T    C  P  D       L  G  A     K  S  H  P  P  D 194
Human           GCGCCCA-GCCCCA--CCTGCCCGGAC-----CTGGGGGC---CAAGAGCCACCCGCCCG 746
Mouse           GCACCCA-GCCCCA--CCTGCCCAGAC-----CTGGGCAC---CAAGAGCCACCCTCCTG 718
Chicken         CCGCAGG-GCCAGG--CCTGCTTGGACAGCACCAAGAGCC---CCCTGGGCGCCCACCCG 692
Frog            GTACTGATGTCAGAAACAGGCATAGAGA-TTCCTTGACACACACACAGGCTGCAGATATG 618
                   *    * *     *  **   **      *  *   *   *    *   *      *
                   K     W  A  Q  G  A  G     A  K  G  Y  L  G  A  V  K  P   211
Human           -ACA---AGTGGGCGCAAGGTGCGG---GGGCCAAAGGCTACCTGGGGGCGGTGAAGCCC 799
Mouse           -ACA---AGTGGGCCCACGGAGCTG---CAGCCAAAGGCTACCTCGGGGCCGTGAAGCCC 771
Chicken         GACA---AGTGGGCGCACGGTGC------AGCCAAGAACCTGCTGGGCCCAGTCAAGAAC 743
Frog            GGGACTCAATTGAAGAATGGTACAGATTCAGTTATTAGTGGGCCAGAAAGGAATGGCATC 678
                   *   * * *    * **  *       *  *        *  *             *
                L  A  G  A  A  G  A  P  G  K  G  S  E  K  G  P  P  N  G  M   231  
Human           CTGGCCGGTGCGGCGGGTGCTCCAGGCAAAGGCTCCGAGAAGGGCCCCCCCAACGGAATG 859
Mouse           TTGGGGGGAGGGGCAGGAGCTCCAGGCAAGGGCTCGGAAAAGGGCCCCCCCAATGGCATG 831
Chicken         CTCGC-----TGCCGAGAGC----AAGAACGGGGCTGAGAAGAACCTGTCCAGCGGCACC 794
Frog            TGTAATGGAGTGTCCAGTAGTCC-TTCAACAGAAATGTCCAGTAGTCCTTCAACAGAACT 737
                           * *  *          **  *    *   **        **   * *  
                M  P    A  P  K  E  A  V  T  G  N  G  I  G  G  K  M  K  I  V 251   
Human           ATGC--CGGCCCCCAAAGAGGCTGTGACGGGCAACGGGATTGGGGGCAAGATGAAGATAG 917
Mouse           ACAC--CAGCCCCTAAGGAGGCAGTGACCGGTAATGGTATTGGGGGCAAGATGAAAATCG 889
Chicken         GGGC--CCCCCCCTCGGGACAGGGTCACCAGCAACGGGCTCGGGGGCAAGATGAAGATCG 852
Frog            GTCCAGCAGTCCTTCAACAGA-ACTGCCAAGCAGTGGTGTTGGAGGGAAGATGAAAATTG 796
                   *  *   **      *     *  *  * *  **  * ** ** ******** ** *
                  K  N  K  N  K  N  G  R  I  V  I  V  M  S  K  Y  M  E  N  G 271 
Human           TCAAGAACAAGAACAAGAACGGACGCATCGTGATCGTGATGAGCAAATACATGGAGAACG 977
Mouse           TCAAGAACAAGAACAAGAATGGGCGCATCGTGATCGTTATGAGCAAGTACATGGAGAACG 949
Chicken         TCAAGAACAAGAACAAGAACGGGCGCATCGTGATCGTCATGAGCAAGTACATGGAGAATG 912
Frog            TGAAAAATAAAAATAAGAATGGGAGAATTGTGATAGTTATGAGTAAATATATGGAAAATG 856
                * ** ** ** ** ***** **  * ** ***** ** ***** ** ** ***** ** *
                  M  Q  A  V  K  I  K  S  G  E  V  A  E  G  E  A  R  S  P  S 291
Human           GCATGCAGGCGGTGAAGATCAAGTCCGGCGAGGTGGCAGAGGGGGAGGCTCGCTCCCCCA 1037
Mouse           GCATGCAGGCAGTGAAAATCAAGTCGGGCGAGGCCGCCGAGGGCGAGGCGCGCTCCCCCA 1009
Chicken         GCATGCAGGCGGTGAAGATCAAGTCTGGGGAGCCGCCCCGGAAGCGGGC----------- 961
Frog            GGATGCAGTCCGTAAAAATAAAGTCTTCAGAGGAGGACTGTGACATGGG----------A 906
                * ****** * ** ** ** *****    ***              **            
                  H  K  K  R  A   A  D  E  R  H  P  P  A  D  R  T  F  K  K   310
Human           GCCACAAGAAGCGGGCA-GCCGACGAGCGCCACCCTCCTGCCGACAGGACTTTTAAAAAG 1096
Mouse           GCCACAAGAAACGTGCT-GCCGAGGAGCGCCATCCCCAGGGCGACAGGACTTTTAAAAAG 1068
Chicken         GCCG-GAGGAGAGGACT-GCTAAGAAGGGTGGGGAGGAGAAGCTGGAGGCCTGGAGGAAG 1019
Frog            GATGTGAGGAGAAGGTTTGATTCCCCAGGCACCCTTAATGGGGACAAAACATGCACAGCC 966
                *     ** *        *         *                    * *  *     
                A  A  G  A     E  E  K  K  V  E  A  P   P  K  R  R  E  E  E  329  
Human           GCGGCGGGCGCA---GAGGAGAAGAAGGTGGAGGCGCC-GCCCAAGAGGAGGGAGGAGGA 1152
Mouse           GCAGCCGGTGCCTCTGAGGAGAAGAAAGCCGAAGTGCC-CTGCAAACGCAGGGAGGAGGA 1127
Chicken         CCGGGCGAGG-----AGAGGGCAGTGGGCAGCAATG---GCCTGAGTGCCGCGGAGGGCG 1071
Frog            CAGGAAGAAAAAACAGAGCATTGGAAGAAGCGTGTGGAATCCCGGGTAAAGATACATGAA 1026
                   *  *                *           *              *      *  
                 V  S  G  V  S    D  P  Q  P  Q  D  A  G  S  R  K  L  S  P   348
Human           GGTGTCCGGGGTTAG--CGATCCGCAGCCCCAGGATGCCGGCTCCCGCAAGCTGTCCCCG 1210
Mouse           GGCTCTGGTGTCGGG--GGACGCGCAGCCCCAGGACCTAGGGTCTCGAAAGCTCTCCCCG 1185
Chicken         AGAGCAGGCAGCCCG--C--TGCTGAGCTGCAGGA---GGGCCCCAGGAAGCCCTCTCCG 1124
Frog            GGTAGTAAAAGTGTGGACAAAGGGTCAGTACATCTTGCAGGCCTCAGAAGGACTTATTCT 1086
                 *            *               **       **     * * *   *   * 
                T  K  E          A  F  G   E  Q  P  L  Q  L  T  T  K  P  D   365  
Human           ACCAAGGAG--------GCCTTTGGA-GAGCAGCCCCTGCAGCTCACCACCAAGCCCGAC 1261
Mouse           ACCAAGGAG--------GCCTTTGGT-GAGCAACCGCTACAGCTCACCACCAAGCCAGAC 1236
Chicken         GGCAAGGAGCTGCCCCTGCCCGTGGCCGAGCAGCCGCTGCAGCTTACCACCAAGCCGGAC 1184
Frog            ACTGCCAGTGA------AACGTTAAATGATCAACCCTTGCAGCTCACCACAAAGAGTAGC 1140
                                   *  *    ** ** **  * ***** ***** ***     *
                L   L  A  W  D   P  A  R  N  T  H  P  P  S  H  H  P  H  P  H 385 
Human           C-TGCTTGCCTGGG-ACCCGGCCCGGAACACGCACCCGCCCTCACACCACCCGCACCCGC 1319
Mouse           C-TGCTGGCCTGGG-ACCCAGCCAGGAGCTCGCACCCGCCCGCCCACCACC--------- 1285
Chicken         C-TCGTGCCCTGGTCGCTGAGCCCCGGGCGTGAGCACAGCC------------------- 1224
Frog            CATGTTCCTATGCCAAATAGGACCAGATCTCCTGTTTATGCAGGGG-------------- 1186
                * *  *    **        * *  *  *           *                   
                  P  H  H  H  H  H  H  H  H  H  H  H  H  A  V  G  L  N  L  S 405
Human           ACCCCCATCACCACCACCACCACCACCACCACCACCACCACGCCGTCGGCCTGAATCTCT 1379
Mouse           ---------ACCATCACCACCACCATCACCACCACCACCATACGGTGGGCCTGAACCTCT 1336
Chicken         ----------------------------CGTCCTCCATGGGACTGAACCTCTCGAGCCC- 1255
Frog            ---------------------------AGCCCTACAATGATTTAGTTTATACAAATC--- 1216
                                               *  * *       *         * *   
                  H  V  R  K  R  C  L  S  E  T  H  G  E  R  E  P  C  K  K  R 425
Human           CCCACGTGCGCAAGCGCTGCCTCTCCGAGACCCACGGCGAGCGCGAGCCCTGCAAGAAGC 1439
Mouse           CCCATGCGCGCAAGCGCTGCCTCTCCGAGACCCATGGGGAGCGTGAGCCCTGTAAGAAGC 1396
Chicken         -CGGCGCGCGGAAGCGCTGCCTGTCAGAGCCGCACGGGGACCGCGAGCCGGGCAAGAAGC 1314
Frog            ------CAAGAAAACGTTGTTTGTCAGAAGCAAATGGGAACAAGGAGCTTTGTAAGAAGA 1270
                         * ** ** **  * ** **  *  * **  *    ****   * ****** 
                  L  T  A  R  S  I  S  T  P  T  C  L  G  G  S  P  A  A  E  R 445   
Human           GGCTGACTGCGCGCAGCATCAGCACCCCCACCTGCCTGGGGGGCAGCCCAGCCGCTGAGC 1499
Mouse           GGTTGACCGCCCGCAGCATCAGCACGCCGACCTGCCTGGGGGGCAGCCCGGTCTCCGAGC 1456
Chicken         GCCTGACATCGCGCAGCATCAGTGCCCCCACCTGCCTCGG------------CCCCGAGC 1362
Frog            CTCTTACATCTCGGAGTGTGAGTGCTCCCGGCATAGTGGAATGCAA----------AGGT 1320
                   * **  * ** **  * **  * **   *    * *                   * 
                                    
Human           GCCCGGCCGACCTGCCACCAGCCGCCGCC---CTCCGGCAGCCCGAGGTCATCCTGCTAG 1556
Mouse           ACCCTGCCAACGTATCCCCCACCGCGGCCTCTCTGCCGCAGCCCGAGGTCATCCTTTTAG 1516
Chicken         GGCCGGA------GCTGCCCGCC---------------CAGCCCGAGGTCATCCTGCTGG 1401
Frog            GGTCTGACCCCTCTTAACGTACC--------TTTACAGGAACCAGATATCATTCTCTTAG 1372
                   * *           *   **                * ** **  **** **  * *

Human           ACTCAGACCTGGATGAACCCATAGACTTGCGCTCGGTCAAGAGCCGCAGCGA----GGCC 1612
Mouse           ACTCAGACCTGGATGAACCCATAGACTTGCGCTGTGTCAAGATGCGCAGCGA----CGCC 1572
Chicken         ACTCAGACCTGGACGAGCCCATAGACTTGCGCTGCGTCAAGCCGCGGGCGGA----GGGC 1457
Frog            ACTCCGACTTGGACGAACCCATAGACCTGCGCTGTGTAAAGTCTCGGTGTGACAGTGACC 1432
                **** *** **** ** ********* ******  ** ***   **    **       *

Human           GGGGAGCCGCCCAGCTCCC--TCCAGGTGAAGCCCGAGACACCGGCGTCGGCGGCGGTGG 1670
Mouse           GGGGAACCGCCCAGCACCC--TCCAGGTGAAGCCCGAGGCTCC---------AGCTGTGG 1621
Chicken         GAGG--CGGCCCTGG------TGCAGGTGAAGCCGGAGGAGCCGCC------GGCGCCGG 1503
Frog            AAGAGGTGGACAAACCTGAGATTCAAGTCACCCAGAATCCTCAGTCAGTTGATGTGGATG 1492
                  *     * *          * ** ** *  *   *    *           *     *

Human           CGGTGGCGGCGGCAGCGGCACCCACCACGACGGCGGAGAAGCCTCCAGCCGAGGCCCAGG 1730
Mouse           CGGCAGTGGTGGCGCCGGCCCCTGCCTCA------GAGAAGCCTCCCGCTGAGGCCCAGG 1675
Chicken         CCGAGCAGCCGCCCGTAGAGCCCCCGCAGCAGCCCAGGCAGGCGGCCGAGGAGGAGGAGG 1563
Frog            TTTGTGAGTCTCAGTTTAAACCTTTCTTTGGGAATATTGTAATTACAGATGTCACAGCGA 1552
                       *            **                       * *  *       * 

Human           ACGAACCTGCAGAGTCGCTGAGCGAGTTCA---------AGCCCTT----CTTTGGGAAT 1777
Mouse           AGGAGCCAGTGGAGCCCTTGAGTGAGTTCA---------AGCCCTT----CTTTGGGAAT 1722
Chicken         AGGAGGAGGCTGAAGGCCTGCGGGAATTCA---------AGCCCTT----CTTTGGGAAT 1610
Frog            ATTGCCTTACTGTCACTTTTAAGGAATATATAACAGTGTGACTCTTATTCCTTTTGAACT 1612
                *          *      *    ** *  *           * ***    **** * * *

Human           ATAATTATCACCGACGTCACCGCGAACTGCCTCACCGTTACTTTCAAGGAGTACGTGACG 1837
Mouse           ATAATTATCACTGACGTCACGGCGAACTGCCTTACAGTCACTTTCAAGGAATACGTGACG 1782
Chicken         ATAATTATCACAGACGTGACCGCGAACTGCCTGACCGTCACCTTCAAGGAGTATGTGACG 1670
Frog            GCATATCTAACTGACGC--TTTCCAGCCCAATTGGCATGATTTTTAATCTGCCC-TATGG 1669
                  *  * * ** ****      * * *    *     * *  ** **        *   *

Human           GTGTAGCCGGAGGGCGTCGGA---AGGGGCGCC--------------------------- 1867
Mouse           GTGTAGTGGGAAGGAGTCGCGCCCACTAGGACTCAGCACCTACAGAGGTTCCCAAGGAGA 1842
Chicken         GTGTGAGGCGGCTGCTCCCCAT----GGGAGCGCAGCCCC------------------GC 1708
Frog            ACACATTTATTAATATATATATCTAGAAGTGCCTAGCAGTGGCTGGATTCTAATAACTTG 1729
                                            *  *                            

Human           ------------------------------------------------------------
Mouse           AAACGCCCCAGTCGCGGTGGCCAGGCCCTTGCTCACTCCCTGGGATCCCGATTGAGTTGT 1902
Chicken         TGCTGCCCCGACCCCAAAGCCTACGTGGGGTGGCATTCCCCGGCTCCCGGTCACTGCGGG 1768
Frog            TTGCCATCCAAGGATCATCATGACA-AAGCTCTTAAATCCAAGTCTGTTTTGAATGAAGC 1788
                                                                            

Human           ------------------------------------------------------------
Mouse           CCACCTCTCACTGTCTCCTTCCACGTGGTGCCTGCGGTCTCACCGCCACGTCCCCTTCCC 1962
Chicken         ATGTGGGGCCCCGCGCTGCCCCACACGGTGCCCACTGCT----------GCTGCTCCCAC 1818
Frog            CTAGGTTAATAATTGTTTGTTTATTTATTTTATATTTATATACCTGGAAATAATCAGCTC 1848
                                                                            

Human           ------------------------------------------------------------
Mouse           TATAGGAGACCTGAGCCTTCCCTGTGGACCACCAGAACTGACCCGCAGC-CCCGAGGCAG 2021
Chicken         TGCGGGCGCTGTGGGGCTGCCCCGGGCGCTATGGGGCCGGGCGGTTA------------- 1865
Frog            TTCAA-TGTTCTTGTTCTGTCTGGGAATTTCTGGTGTTTAGCAGTCAATGTTTCAGTGTT 1907
                                                                            

Human           ------------------------------------------------------------
Mouse           TCTCAGAGCTATAGTATTATATTTT-AACCGTGCTAACTGTCAAGTGCTGACTCTACTCC 2080
Chicken         -CTCAGAGTTATAGTATTATATTTTGAACAGTGCTGAACTTGTTGAGTGATTCTTGCTCC 1924
Frog            TCACCTTATTACACAAACGAAAGAGAGAGGAGGGTGGGCTTTATACCTTGTGTTTTTTGT 1967
                                                                            

Human           ------------------------------------------------------------
Mouse           GGTTTGTACGTGGTGTTATTCTTGAAATGTATTGTTTGAGCTCAGAAGGCCCGACTATCC 2140
Chicken         CGTTTGTACGTGGTGTTA---TTGAAATGTATTGTTTGAGCT--GAAGGCTGGTCGCCCT 1979
Frog            TGTTTTTTTTTTAACATTTATTTGAATTTTGTTTGCAAAAAA--AAAAAAATGACGAGCT 2025
                                                                            

Human           ------------------------------------------------------------
Mouse           CCCTTAGGGCTCGATATATATATACATATATATATATTTATTTGTAGGTATTTATATATT 2200
Chicken         CCGACTGTGCTA-------------------ATATATTTATTTGTAGGTATTTATATAAT 2020
Frog            CTTTCTAGTATA--TGCTGCTATTAGAATTGTTAATGCTTCCTGTAGCTGCTTGGATGTA 2083
                                                                            

Human           ------------------------------------------------------------
Mouse           GAAATATAAAAACCTAGATTTATGGAGTTTCCTCTAGATCATGTTATATTCTATATCAGA 2260
Chicken         GAAATATAAAG-CCTAGATTTATGGAGT---CCCTAGATCACCTTATAAACTATATCAGA 2076
Frog            AAAATAAATGG----AGAATCGTTATGTGAGCAGCATGAAGCTGTATAAGAGAGGAC--- 2136
                                                                            

Human           ------------------------------------------------------------
Mouse           CAGACTATTTTAAGTTGGCCTTTTCTTTCCCCTTCATTCAGTATTTTGATTTTATTTCCC 2320
Chicken         CGACTATTTTCTGTTCTCCTTTTTAACCATTTGGCATTTGTT------------------ 2118
Frog            TGGGTATATCCAGGTTCCGCTTCAAATTCTCCTCCATGTGTAAAAATATTGTATTGTGTA 2196
                                                                            

Human           ------------------------------------------------------------
Mouse           CTTCTCCAGGAACTGCGACACCAGTAACCTTGGTATATATTTTTTGATACTGTACACATG 2380
Chicken         ------------------------------------------------------------
Frog            ATTATAATACAGGGTTATAAAAAGGACTGTGTTTCCAAGTCTTGCTTCAGTATGTATTTA 2256
                                                                            

Human           ------------------------------------------------------------
Mouse           GGTGTGTTGTTTCTATGTGCAAAAAAAAAAGTTTGTTAAAAGGCTAAAGAGCTCTCTAGA 2440
Chicken         ------------------------------------------------------------
Frog            TGTTCTTCATCTGCAGACTTACATTGTCCTCTGGCATGCACTCTTAACTGTCCCTTTAGT 2316
                                                                            

Human           ------------------------------------------------------------
Mouse           ACCTGCTGCTATAGAAATGTCTGAACTATAAGCTTCCAATTATTACCTGCTTGAATGTAA 2500
Chicken         ------------------------------------------------------------
Frog            AGCGCTTTAATTGAAATAATTCCAGATCCTTTTCTATCATGTTAGACAAGGAAAATAAAA 2376
                                                                            

Human           ------------------------------------------
Mouse           ATATTAAATGGAGATGTTGAAGGTGCAAAAAAAAAAAAAAAA 2542
Chicken         ------------------------------------------
Frog            TTGTAATACTTACACTATATACATTTTTTTAAAAAAAAAAA- 2417
                                                          

Your guide tree:

635918.142146-29166.dnd

(
(
Human:0.13758,
Mouse:0.04881)
:0.10321,
Chicken:0.10127,
Frog:0.44500);