NCBI Logo   NCBI » UniGene » Fundulus heteroclitus
PubMed Protein Genome Structure PopSet Taxonomy OMIM
 
 Search
  Limits Index History Details    

Fundulus heteroclitus: UniGene Build #1

Lineage:cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Elopocephala; Clupeocephala; Euteleostei; Neognathi; Neoteleostei; Eurypterygii; Ctenosquamata; Acanthomorpha; Euacanthomorpha; Holacanthopterygii; Acanthopterygii; Euacanthopterygii; Percomorpha; Smegmamorpha; Atherinomorpha; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus



Sequences Included in UniGene
Known genes are from GenBank 14 Jul 2005
ESTs are from dbEST through 14 Jul 2005

124   mRNAs
0   Models
6   HTC
10   EST, 3'reads
2,088   EST, 5'reads
31,759   EST, other/unknown

33,987   total sequences in clusters

Build Method: Transcript Based

Alignments between all transcript sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

3,154   sets total
112   sets contain at least one mRNA
6   sets contain at least one HTC sequence
3,102   sets contain at least one EST
60   sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Fhe build 1
1025-2048   2
513-1024   7
257-512   5
129-256   17
65-128   24
33-64   80
17-32   132
9-16   252
5-8   711
3-4   1491
2   69
1   364




UniGene Links
Library Browser
DDD
Query Tips
FAQ


Other Links
Gene
HomoloGene
dbEST
Trace Archive
BLAST
CGAP
MGC cDNA Clones



Questions or Comments?
 E-mail the NCBI Help Desk
firstgov logo
National Center for Biotechnology Information
U.S. National Library of Medicine
National Institutes of Health
DHHS logo
Disclaimer  | Freedom of Information Act  |  Privacy Policy