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Fundulus heteroclitus RESEARCH
Instructional Web Page
http://socrates.barry.edu/snhs-plin
Permission to use the above image granted by Sportfishing and Aquatic Resources Education Program (SAREP) http://www.sarep.cornell.edu/Sarep/index.htm
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{click on [**] to view references}
Oocyte Maturation [**]; Germinal Vesical Breakdown (GVBD) [**]; Oogenesis; Steroidogenesis [**]; Steroids; Cholesterol [**]; Progesterone; 17 Alpha,20 Beta-Dihydroxy-4-Pregnen-3-One [**]; Testosterone; Estradiol [**]; Aromatase; cAMP [**]; Protein Kinase C; Phorbol Ester [**]; Isoquinolinesulfonamide (H-8) [**]; Ovarian Follicles [**]; in vitro Culture [**]; Radioimmunoassay (RIA); Bioassay [**];
Pituitary; Gonadotropins [**](GTH) [**]; FSH; LH; GTH I [**]; GTH II [**]; GTH Alpha Subunit; GTH Beta Subunits [**][**]; Gonadopeptides; Inhibin [**]; Activin; Endocrine; Paracrine; Autocrine [**]; Cloning; DNA Sequencing ; Polymerase Chain Reaction (PCR); cDNA Library [**]; Nucleotide Sequences [**][**];
Polycomb Gene [**]; Rana pipiens (Leopard Frog) [**]; Xenopus laevis (African Claw Toad); Fundulus heteroclitus (Mummichog; Killifish) [**]; Danio rerio (Zebrafish) [**]; Amphibian [**]; Teleost [**]
{click on [**] to view references}
Fundulus heteroclitus (Mummichog; Killifish) [**];
Rana pipiens (Leopard Frog) [**];
Xenopus laevis (African Claw Toad);
Danio rerio (Zebrafish) [**];
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Pituitary;
Gonadotropins [**](GTH) [**]; FSH; LH;
GTH I [**]; GTH II [**]; Antibodies [**];
GTH Alpha Subunit; GTH Beta Subunits [**][**];
Gonadopeptides; Inhibin [**]; Activin;
Endocrine; Paracrine; Autocrine [**];
Cloning; DNA Sequencing ; Polymerase Chain Reaction (PCR);
cDNA Library [**]; Nucleotide Sequences [**][**];
Glycoproteins [**]; Gonadotropin Sequences[**];
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Oocyte Maturation [**];
Germinal Vesical Breakdown (GVBD) [**];
Oogenesis; Steroidogenesis [**]; Steroids;
Cholesterol [**]; Progesterone;
17 Alpha,20 Beta-Dihydroxy-4-Pregnen-3-One [**];
Testosterone; Estradiol [**];
Aromatase; cAMP [**]; Protein Kinase C;
Phorbol Ester [**]; Isoquinolinesulfonamide (H-8) [**];
Ovarian Follicles [**]; in vitro Culture [**];
Radioimmunoassay (RIA); Bioassay [**];
Grants
NIH Office of Extramural Research
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To view other federally funded projects on Gonadotropins,
Click on the CRISP logo below, and enter "Gonadotropins" as Search Terms in the Query Form and hit Submit Query
Computer Retrieval of Information
on Scientific Projects
https://www-commons.cit.nih.gov/crisp/index.html
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I have a long-standing interest in the endocrine and cellular mechanisms responsible for ovarian follicle development and oocyte maturation.
This is a two prong project consisting of a molecular and a physiological component.
The molecular portion focuses on the endocrine regulation of gonadotropins by sex-steroids and gonadal peptides at the pretranslational level.
The physiological portion of the projects concentrates on the paracrine (local effect at neighboring cells) and autocrine (local effect in the same cells) biological activities of the gonadal peptides in the ovary.
C. Lavett Smith
Permission to use the Copyright DNA image granted by:Paul A. Thiessen
http://cherubino.med.jhmi.edu/~paul
copyright © 1998 by the Marine Biological Laboratory
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Dept. of Natural Resources@Cornell.edu
http://www.sarep.cornell.edu/Sarep/fish/Cyprinodontidae/mummichog.html
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Fundulus Ovary (40x) Oocytes w/ Germinal Vesicle
>gi|213251|gb|M87015.1|FUNGTHII Fundulus heteroclitus gonadotropin II
beta subunit (GTHII beta) mRNA, complete cds
CTCAGGATAGAGGACTGAAGTTTTCACTGATGGTGTGTTTGTTTCTGGGAGCCTCCTCATTCATTTGGTC CCTGGCACCCGCGGCAGCAGCCTTTCAGCTCCCTCGCTGTCAGCTCCTCAACCAGACAATATCTCTAGAG AAGAGGGGCTGTTCTGGCTGTCACAGAGTGGAAACCACCATCTGCAGCGGGTACTGCGCGACCAAGGATC CCAACTATAAGACATCATATAACAAAGCAATCCAGCATGTGTGCACTTATGGGGATTTGTACTACAAGAC ATTCGAGTTTCCTGAATGTGTGCCCGGAGTTGACCCAGTTGTCACCTACCCCGTTGCCCTGAGCTGCCGC TGTGGAGGCTGTGCCATGGCCACATCCGACTGCACCTTCGAGAGCCTTCAGCCTGACTTTTGCATGAATG ACATCCCATTTTACCACTAGCCATGTGT
Fundulus heteroclitus gonadotropin Nucleotide Sequences
GenBank Database http://www.ncbi.nlm.nih.gov/Web/Genbank/index.html
GenBank is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences ( Nucleic Acids Research 1998 Jan 1;26(1):1-7). There are approximately 2,570,000,000 bases in 3,525,000 sequence records as of April 1999. As an example, you may view the record for the neurofibromatosis gene. The complete release notes for the current version of GenBank are available. A new release is made every two months. GenBank is part of the International Nucleotide Sequence Database Collaboration, which is comprised of the DNA DataBank of Japan (DDBJ), the European Molecular Biology Laboratory (EMBL), and GenBank at NCBI. These three organizations exchange data on a daily basis.
Other Formats:
![[FASTA Format]](../images/fasta.gif){kind=small}
![[Graphical View]](../images/graphic.gif){kind=small}
![[1 medline link]](../images/medline.gif){kind=small}
![[1 protein link]](../images/protein.gif){kind=small}
![[2 nucleotide neighbors]](../images/relseq.gif){kind=small}
LOCUS FUNGTHII 448 bp mRNA VRT 18-SEP-1997
DEFINITION Fundulus heteroclitus gonadotropin II beta subunit (GTHII beta)
mRNA, complete cds.
ACCESSION M87015
Fundulus heteroclitus gonadotropin II beta subunit (GTHII
beta) mRNA, complete cds
GenBank gb|M87015|;
FASTA Nucleotide FUNGTHII gi[213251]
; FASTA Protein gi|213252
Deduced Fundulus GTH II beta Protein Sequence:
>gi|213252|gb|AAB59963.1| gonadotropin II beta subunit MVCLFLGASSFIWSLAPAAAAFQLPRCQLLNQTISLEKRGCSGCHRVETTICSGYCATKDPNYKTSYNKA IQHVCTYGDLYYKTFEFPECVPGVDPVVTYPVALSCRCGGCAMATSDCTFESLQPDFCMNDIPFYH
Fundulus heteroclitus gonadotropin I beta subunit (GTHI beta) mRNA, complete
cds
GenBank gb|M87014|;
FASTA Nucleotide FUNGTHI gi[213249];
FASTA Protein gi|213250
Fundulus heteroclitus gonadotropin, alpha subunit (GTH) mRNA, complete cds. GenBank gb|U12923|;FASTA Nucleotide gi|531886|; FASTA Protein gi|531887
Fundulus heteroclitus initiation factor (EIF-4A) mRNA, 3'end
GenBank gb|M89792|;
FASTA Nucleotide FUNEIF4A gi [213247];
FASTA Protein gi|213248
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Blast (sequence similarity) Search : http://www.ncbi.nlm.nih.gov/BLAST/
Fundulus heteroclitus Gonadotropin Sequences as Query
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|213251|gb|M87015|FUNGTHII Fundulus heteroclitus
gonadotropin II beta subunit (GTHII beta) mRNA, complete cds.
(448 letters)
Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences
390,119 sequences; 929,516,821 total letters
Searching..................................................done
If you have any problems or questions with the results of this search
please refer to the BLAST
FAQs
Score E Sequences producing significant alignments: (bits) Value gb|M87015|FUNGTHII Fundulus heteroclitus gonadotropin II beta s... 888 0.0gb|L35096|MOZGONAIIB Morone saxatilis (striped bass) gonadotrop... 100 4e-19gb|L11722|AANGBS Acanthopagrus latus gonadotropin beta-subunit ... 76 6e-12gb|S51112|S51112 thyrotropin beta subunit [human, lymphocytes, ... 46 0.005dbj|D00578|RATTSHBA Rattus norvegicus mRNA for TSH beta subunit... 46 0.005
gb|L35096|MOZGONAIIB Morone saxatilis (striped bass) gonadotropin II beta-subunit mRNA, complete cds Length = 590 Score = 99.6 bits (50), Expect = 4e-19 Identities = 149/182 (81%), Positives = 149/182 (81%)
Query: 243 cagcatgtgtgcacttatggggatttgtactacaagacattcgagtttcctgaatgtgtg 302
Sbjct: 259 cagcatgtgtgcacgtaccgggacttacactacaagacatttgagcttcctgactgtcca 318
--------------------------------------
Query: 303 cccggagttgacccagttgtcacctaccccgttgccctgagctgccgctgtggaggctgt 362
Sbjct: 319 cctggtgtggacccaaccgtcacctaccccgtggctcagagctgccactgcggccgctgt 378
--------------------------------------
Query: 363 gccatggccacatccgactgcaccttcgagagccttcagcctgacttttgcatgaatgac 422
Sbjct: 379 gccatggacacgtctgactgtaccttcgagagcctgcagcccaacttctgcatgaatgac 438
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GTH II beta
BLAST 1 - Fundulus heteroclitus gonadotropin II beta subunit (GTHII beta): BlastN Search using gi|213251 as Query nucleotide sequence Blast1N
BLAST 2 - Fundulus heteroclitus gonadotropin II beta subunit (GTHII beta): BlastP Search using gi|213252 as Query protein sequence Blast2P
GTH I beta
BLAST 3 - Fundulus heteroclitus gonadotropin I beta subunit (GTHI beta): BlastN Search using gi|213249 as Query nucleotide sequence Blast3N
BLAST 4 - Fundulus heteroclitus gonadotropin I beta subunit (GTHI beta): BlastP Search using gi|213250 as Query protein sequence Blast4P
GTH alpha
BLAST 5 - Fundulus heteroclitus gonadotropin alpha subunit (GTH alpha): BlastN Search using gi|531886 as Query nucleotide sequence Blast5N
BLAST 6 - Fundulus heteroclitus gonadotropin alpha subunit (GTH alpha): BlastP Search using gi|531887 as Query protein sequence Blast6P
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Professor John Winfield, Univ.of Glasgow, UK
http://www.chem.gla.ac.uk/protein/glyco/swiss.html#Alpha
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C.
Lavett Smith| Calman B, Lin YW, Wallace RA. | Related Articles |
Steroidogenesis in Fundulus heteroclitus V.: purification, characterization, and metabolism of 17 alpha,20 beta-dihydroxy-4-pregnen-3-one by intact follicles and its role in oocyte maturation.
Gen Comp Endocrinol. 1993 Oct;92(1):1-15.
PMID: 8262351; UI: 94085748Steroidogenesis in Fundulus heteroclitus. IV. Dichotomous effects of a phorbol ester on ovarian steroid production and oocyte maturation.
J Exp Zool. 1992 Sep 1;263(3):254-64.
PMID: 1453155; UI: 93085336Steroidogenesis in Fundulus heteroclitus. II. Production of 17 alpha-hydroxy-20 beta-dihydroprogesterone, testosterone, and 17 beta-estradiol by various components of the ovarian follicle.
Gen Comp Endocrinol. 1989 Nov;76(2):230-40.
PMID: 2591717; UI: 90076882Effects of isoquinolinesulfonamide H-8 on Fundulus heteroclitus ovarian follicles: role of cyclic nucleotide-dependent protein kinases on steroidogenesis and oocyte maturation in vitro.
Comp Biochem Physiol C Pharmacol Toxicol Endocrinol. 1997 May;117(1):75-81.
PMID: 9185330; UI: 97328815.Oocyte maturation in the mummichog (Fundulus heteroclitus): effects of steroids on germinal vesicle breakdown of intact follicles in vitro.
Gen Comp Endocrinol. 1986 May;62(2):281-9.
PMID: 3781226; UI: 87055192Analytical and experimental studies on the relationship between Na+, K+, and water uptake during volume increases associated with Fundulus oocyte maturation in vitro.
J Comp Physiol [B]. 1992;162(3):241-8.
PMID: 1613162; UI: 92308447Oogenesis in Fundulus heteroclitus. I. Preliminary observations on oocyte maturation in vivo and in vitro.
Dev Biol. 1978 Feb;62(2):354-69. No abstract available.
PMID: 564305; UI: 78107517.
Oogenesis in Fundulus heteroclitus. III. Vitellogenesis.
J Exp Zool. 1983 Jun;226(3):441-57.
PMID: 6886667; UI: 83293294.Major protein changes during vitellogenesis and maturation of Fundulus oocytes.
Dev Biol. 1985 Aug;110(2):492-8.
PMID: 4018410; UI: 85258612.Serum hormone levels associated with spawning activity in the mummichog, Fundulus heteroclitus.
Gen Comp Endocrinol. 1988 May;70(2):345-54.
PMID: 3384313; UI: 88255815.
Pattern of vitellogenesis and follicle maturational competence during the ovarian follicular cycle of Fundulus heteroclitus.
Gen Comp Endocrinol. 1996 Jul;103(1):24-35.
PMID: 8812325; UI: 96411293.
Oocyte sensitivity to serotonergic regulation during the follicular cycle of the teleost Fundulus heteroclitus.
Biol Reprod. 1998 Jul;59(1):53-61.
PMID: 9674993; UI: 98337750Functional heterologous gap junctions in Fundulus ovarian follicles maintain meiotic arrest and permit hydration during oocyte maturation.
Dev Biol. 1993 Nov;160(1):228-35.
PMID: 8224539; UI: 94040370.Semilunar follicular cycle of an intertidal fish: the Fundulus model.
Biol Reprod. 1996 Apr;54(4):809-18.
PMID: 8924500; UI: 96249823.
Review Articles
A non-salmonid model for the study of fish reproduction. In: Proceedings of the Fourth International Symposium on Reproductive Physiology of Fish (A.P. Scott, J.P. Sumpter, D.E. Kime and M.S. Rolfe, eds.) pp.74-76. Lin Y.-W. P., T.R. Petrino, and R.A. Wallace (1991).
Metabolic and developmental aspects of steroidogenesis in teleost ovaries. Compart.. Endocrinol. (Life Sci. Adv.) 8:33-45. Lin Y.-W. P., T.R. Petrino, and R.A. Wallace (1989).
Fundulus heteroclitus
Adult. Size approximately 8cm.
Photo by David Remsen
[See Related Articles] on Fundulus heteroclitus
Fundulus heteroclitus Ubiquitin-Conjugating Enzyme E2A, complete cds
Clones >L_1a #3 Sep 07 01
1 CCTGGAGCCC GTCAGTATAG TTGAGCTGTC AGTAAGGGCC TCAGCAGCCA AGACATGTCC
61 ACCCCGGCCA GACGAAGACT TATGAGAGAT TTTAAACGGC TACAAGAAGA TCCTCCAGCT
121 GGTGTCAGTG GAGCCCCTTC TGAAAACAAC ATCATGGTGT GGAATGCAGT CATTTTTGGC
181 CCTGAAGGAA CTCCCTTTGA GGATGGTACA TTTAAACTCA TAGTAGAATT TACAGAAGAA
241 TATCCCAACA AACCCCCCAC AGTGCGATTT GTCTCCAAGA TGTTTCATCC AAATGTCTAC
301 GCAGACGGCA GTATATGTCT AGACATTCTT CAGAACCGAT GGAGTCCCAC TTACGACGTG
361 TCCTCCATTC TCACTTCCAT CCAGTCCCTG CTCGATGAAC CAAACCCCAA CAGTCCGGCC
421 AACAGCCAAG CGGCCCAGCT GTACCAGGAG AACAAGCGGG AGTACGAGAA GCGGGTGTCT
481 GCTATAGTCG AACAAAGCTG GAGGGACAGC TGACCTGACA ATCCCCACCG CTGAGCGCCT
541 CATCTTCAAG CTGTGTGCTG CAAGTTTTAG TGGAGTAACT GAACTTTTAA ACATTTTTTG
601 CTCCCATTTA TGTTGGTTTT CCTTTTACGC TTTTATGCAC TTTACCTTCA ACTCTCCCGA
661 CAAGAGTTTT TTGTTTTTCT TTCNGCCCAG CGAGAAGTTC TTTTTATCTG GTTGCCTCTT
721 TTTTCTAGTC AACCAGGGGG AAATGTGCTT CGTCAGTATG GGCCCGTTAA GCAAAAAAAA
781 ACCAGGAAAA AAAAAAAAAA AAAGTCGACC GCCGGGCCGC GAATTTCCGN CCG
Fundulus heteroclitus Ubiquitin-Conjugating Enzyme E2A
55 atgtccaccccggccagacgaagacttatgagagattttaaacgg
M S T P A R R R L M R D F K R
100 ctacaagaagatcctccagctggtgtcagtggagccccttctgaa
L Q E D P P A G V S G A P S E
145 aacaacatcatggtgtggaatgcagtcatttttggccctgaagga
N N I M V W N A V I F G P E G
190 actccctttgaggatggtacatttaaactcatagtagaatttaca
T P F E D G T F K L I V E F T
235 gaagaatatcccaacaaaccccccacagtgcgatttgtctccaag
E E Y P N K P P T V R F V S K
280 atgtttcatccaaatgtctacgcagacggcagtatatgtctagac
M F H P N V Y A D G S I C L D
325 attcttcagaaccgatggagtcccacttacgacgtgtcctccatt
I L Q N R W S P T Y D V S S I
370 ctcacttccatccagtccctgctcgatgaaccaaaccccaacagt
L T S I Q S L L D E P N P N S
415 ccggccaacagccaagcggcccagctgtaccaggagaacaagcgg
P A N S Q A A Q L Y Q E N K R
460 gagtacgagaagcgggtgtctgctatagtcgaacaaagctggagg
E Y E K R V S A I V E Q S W R
505 gacagctga 513
D S *
|
Blastx of Clones >L_1a #3 Sep 07 01
Sequences producing significant alignments: (bits) Value gi|9790041|ref|NP_062642.1| ubiquitin-conjugating enzyme E2... 310 1e-83 gi|4507769|ref|NP_003327.1| ubiquitin-conjugating enzyme E2... 307 8e-83 gi|4507771|ref|NP_003328.1| ubiquitin-conjugating enzyme E2... 304 5e-82 gi|12847438|dbj|BAB27570.1| (AK011363) putative [Mus musculus] 302 2e-81 gi|106346|pir||S17516 hypothetical protein - human 294 7e-79 gi|14286180|sp|P25153|UBC6_DROME UBIQUITIN-CONJUGATING ENZY... 278 5e-74 gi|1717853|sp|P52478|UBC1_CAEEL UBIQUITIN-CONJUGATING ENZYM... 277 9e-74 gi|103350|pir||A39392 RAD6 DNA-repair homolog Dhr6 - fruit ... 275 3e-73 gi|7497060|pir||T32959 hypothetical protein C35B1.1 - Caeno... 268 6e-71 gi|8118527|gb|AAF73016.1|AF262934_1 (AF262934) ubiquitin co... 259 2e-68 gi|7108763|gb|AAF36529.1|AF132074_1 (AF132074) RAD6 homolog... 259 2e-68 gi|7108761|gb|AAF36528.1|AF132073_1 (AF132073) RAD6 homolog... 258 3e-68 gi|136640|sp|P25866|UBC2_WHEAT UBIQUITIN-CONJUGATING ENZYME... 257 8e-68 gi|7108765|gb|AAF36530.1|AF132075_1 (AF132075) RAD6 homolog... 257 1e-67 gi|15223746|ref|NP_172892.1| ubiquitin carrier protein, put... 257 1e-67 gi|464980|sp|P35130|UBC2_MEDSA UBIQUITIN-CONJUGATING ENZYME... 257 1e-67 gi|13516451|dbj|BAB40310.1| (AB026055) ubiquitin-conjugatin... 256 2e-67 gi|15227030|ref|NP_178379.1| putative ubiquitin-conjugating... 256 2e-67 gi|16152184|gb|AAL14998.1|AF419316_1 (AF419316) RAD6-like p... 255 4e-67 gi|13516453|dbj|BAB40311.1| (AB026056) ubiquitin-conjugatin... 254 5e-67 gi|15241864|ref|NP_201060.1| ubiquitin-conjugating enzyme E... 240 9e-63 gi|1174845|sp|P23566|UBC2_SCHPO UBIQUITIN-CONJUGATING ENZYM... 237 1e-61 gi|11272418|pir||T45220 ubiquitin--protein ligase (EC 6.3.2... 235 4e-61 gi|1717855|sp|P52493|UBC2_NEUCR UBIQUITIN-CONJUGATING ENZYM... 235 4e-61 gi|1816660|gb|AAB47850.1| (U86521) NhRAD6 [Haematonectria h... 234 5e-61 gi|15081749|gb|AAK82529.1| (AY048267) AT5g62540/K19B1_15 [A... 234 9e-61 gi|3659954|pdb|1AYZ|A Chain A, Crystal Structure Of The Sac... 233 2e-60 gi|6136093|sp|O74201|UBC2_CANAL UBIQUITIN-CONJUGATING ENZYM... 233 2e-60 gi|6321380|ref|NP_011457.1| Involved in DNA repair and spor... 233 2e-60 gi|6010087|emb|CAB57250.1| (AJ270223) putative ubiquitin ca... 176 2e-43 gi|7768300|emb|CAB11153.2| (Z98551) putative ubiquitin-conj... 173 2e-42 gi|7494269|pir||T18512 hypothetical protein C0855w - malari... 165 4e-40 gi|11907996|gb|AAG41428.1| (AF316536) ubiquitin-conjugating... 154 7e-37 gi|12718396|emb|CAC28704.1| (AL513444) probable ubiquitin-c... 144 1e-33 gi|13811942|ref|NP_113070.1| ubiquitin conjugating enzyme [... 139 4e-32 gi|15234339|ref|NP_194525.1| ubiquitin-protein ligase UBC9 ... 135 6e-31 gi|11762186|gb|AAG40371.1|AF325019_1 (AF325019) AT4g27960 [... 135 6e-31 gi|15227290|ref|NP_179265.1| putative ubiquitin-conjugating... 134 1e-30 gi|15238706|ref|NP_200142.1| ubiquitin-conjugating enzyme E... 134 1e-30 gi|14326529|gb|AAK60309.1|AF385718_1 (AF385718) At1g64230/F... 134 1e-30 gi|441457|emb|CAA51821.1| (X73419) ubiquitin conjugating en... 133 2e-30 gi|5762457|gb|AAD51109.1|AF176040_1 (AF176040) ubiquitin-co... 133 2e-30 gi|15238155|ref|NP_198985.1| ubiquitin-conjugating enzyme E... 132 3e-30 gi|2668744|gb|AAB88617.1| (AF034946) ubiquitin conjugating ... 132 3e-30 gi|13386314|ref|NP_082778.1| RIKEN cDNA 1700013N18 gene [Mu... 132 4e-30 gi|456568|gb|AAA64427.1| (L29077) ubiquitin conjugating enz... 132 4e-30 gi|9989034|gb|AAG10797.1|AC022284_2 (AC022284) Ubiquitin-co... 132 4e-30 gi|464981|sp|P35135|UBC4_LYCES UBIQUITIN-CONJUGATING ENZYME... 132 4e-30 gi|15241138|ref|NP_200426.1| ubiquitin-conjugating enzyme-l... 132 5e-30 gi|15231957|ref|NP_187482.1| putative ubiquitin-conjugating... 132 5e-30 gi|9454557|gb|AAF87880.1|AC012561_13 (AC012561) Putative ub... 131 6e-30 gi|15231956|ref|NP_187481.1| putative ubiquitin conjugating... 131 6e-30 gi|15223577|ref|NP_175466.1| cyclin-specific ubiquitin carr... 131 6e-30 gi|4507773|ref|NP_003329.1| ubiquitin-conjugating enzyme E2... 131 8e-30 gi|4100646|gb|AAD00911.1| (AF001948) putative ubiquitin con... 130 1e-29 gi|8393719|ref|NP_057067.1| ubiquitin-conjugating enzyme HB... 130 1e-29 gi|6323664|ref|NP_013735.1| ubiquitin conjugating enzyme; Q... 130 2e-29 gi|10185167|emb|CAC08543.1| (AL441603) ubiquitin-conjugatin... 129 2e-29 gi|6425521|emb|CAB60431.1| (AL110500) contains similarity t... 129 3e-29 gi|2501434|sp|O00102|UBC7_SCHPO UBIQUITIN-CONJUGATING ENZYM... 129 4e-29 gi|7298165|gb|AAF53401.1| (AE003644) BG:DS01486.1 gene prod... 129 4e-29 gi|5381319|gb|AAD42941.1|AF091621_1 (AF091621) ubiquitin-co... 129 4e-29 gi|2136339|pir||I59365 ubiquitin conjugating enzyme - human... 129 4e-29 gi|464982|sp|P35128|UBC3_DROME UBIQUITIN-CONJUGATING ENZYME... 128 7e-29 gi|15290047|dbj|BAB63741.1| (AP003294) contains ESTs C97279... 128 7e-29 gi|14780721|ref|XP_036087.1| ubiquitin-conjugating enzyme E... 128 7e-29 gi|15219231|ref|NP_178008.1| ubiquitin-conjugating enzyme E... 127 9e-29 gi|15219947|ref|NP_173133.1| ubiquitin conjugating enzyme (... 127 1e-28 gi|6692118|gb|AAF24583.1|AC007764_25 (AC007764) F22C12.2 [A... 127 1e-28 gi|4507775|ref|NP_003330.1| ubiquitin-conjugating enzyme E2... 127 1e-28 gi|2129758|pir||S71209 ubiquitin--protein ligase (EC 6.3.2.... 127 2e-28 gi|7287841|gb|AAF44879.1|AE003406_84 (AE003416) hypothetica... 127 2e-28 gi|464979|sp|P35129|UBC2_CAEEL UBIQUITIN-CONJUGATING ENZYME... 127 2e-28 gi|1174849|sp|P46595|UBC4_SCHPO UBIQUITIN-CONJUGATING ENZYM... 127 2e-28 gi|136643|sp|P25867|UBC1_DROME UBIQUITIN-CONJUGATING ENZYME... 127 2e-28 gi|7293244|gb|AAF48626.1| (AE003502) Ubc7 gene product [Dro... 127 2e-28 gi|7621708|gb|AAF65153.1|AF246690_1 (AF246690) putative E2 ... 126 2e-28 gi|6815106|dbj|BAA90392.1| (AP001081) EST AU029921(E50230) ... 126 2e-28 gi|4507777|ref|NP_003331.1| ubiquitin-conjugating enzyme E2... 126 2e-28 gi|15231025|ref|NP_188641.1| ubiquitin-conjugating enzyme, ... 126 2e-28 gi|7799043|emb|CAB90824.1| (AJ277746) ubiquitin conjugating... 126 3e-28 gi|12833659|dbj|BAB22614.1| (AK003163) putative [Mus musculus] 126 3e-28 gi|4507781|ref|NP_003334.1| ubiquitin-conjugating enzyme E2... 126 3e-28 gi|12838544|dbj|BAB24239.1| (AK005788) putative [Mus musculus] 125 3e-28 gi|477134|pir||A48145 ubiquitin-conjugating enzyme ubc-2 - ... 125 4e-28 gi|6320264|ref|NP_010344.1| ubiquitin-conjugating enzyme; U... 125 4e-28 gi|12249089|dbj|BAB20414.1| (AB032739) bendless protein [Ra... 125 6e-28 gi|4507793|ref|NP_003339.1| ubiquitin-conjugating enzyme E2... 124 8e-28 gi|15231436|ref|NP_190230.1| ubiquitin conjugating enzyme E... 124 8e-28 gi|12843975|dbj|BAB26188.1| (AK009276) putative [Mus musculus] 124 8e-28 gi|5917672|gb|AAD55983.1|AF161722_1 (AF161722) ubiquitin-co... 124 8e-28 gi|2194010|pdb|1U9A|A Chain A, Human Ubiquitin-Conjugating ... 124 1e-27 gi|3323498|gb|AAC39499.1| (AF030296) ubiquitin conjugating ... 124 1e-27 gi|4507785|ref|NP_003336.1| ubiquitin-conjugating enzyme E2... 124 1e-27 gi|3212324|pdb|1A3S| Human Ubc9 124 1e-27 gi|3915189|sp|P56616|UBCB_XENLA UBIQUITIN-CONJUGATING ENZYM... 124 1e-27 gi|7294569|gb|AAF49909.1| (AE003541) CG10682 gene product [... 124 1e-27 gi|12061049|gb|AAG48365.1|AF332623_1 (AF332623) ubiquitin-c... 124 1e-27 gi|3915196|sp|Q95044|UBCB_SPISO UBIQUITIN-CONJUGATING ENZYM... 123 2e-27 gi|7437988|pir||T02943 ubiquitin-conjugating enzyme - maize... 123 2e-27
>gi|9790041|ref|NP_062642.1| ubiquitin-conjugating enzyme E2A (RAD6 homolog);
ubiquitin-conjugating enzyme HR6A [Mus musculus]
gi|13632612|ref|XP_010361.2| ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Homo sapiens]
gi|15311818|ref|XP_054619.1| hypothetical protein XP_054619 [Homo sapiens]
gi|3769549|gb|AAC64563.1| (AF089812) ubiquitin-conjugating enzyme HR6A [Mus musculus]
gi|4883773|gb|AAD31646.1| (AF120212) ubiquitin-conjugating enzyme [Gallus gallus]
gi|14485244|gb|AAK62984.1|AF383148_1 (AF383148) ubiquitin-conjugating enzyme HR6A [Mus musculus]
gi|14603455|gb|AAH10175.1|AAH10175 (BC010175) ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Homo
sapiens]
Length = 152
Score = 310 bits (793), Expect = 1e-83
Identities = 149/151 (98%), Positives = 150/151 (98%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKL +EFT
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 507
PANSQAAQLYQENKREYEKRVSAIVEQSWRD
Sbjct: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 151
>gi|4507769|ref|NP_003327.1| ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Homo sapiens]
gi|1351346|sp|P49459|UBCA_HUMAN UBIQUITIN-CONJUGATING ENZYME E2-17 KDA (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN) (HR6A)
gi|108016|pir||A41222 ubiquitin--protein ligase (EC 6.3.2.19) E2A - human
gi|184044|gb|AAA35981.1| (M74524) HHR6A (Human homologue of yeast RAD 6); putative [Homo
sapiens]
gi|11036948|gb|AAG27430.1| (AF294366) ubiquitin-conjugating enzyme HR6A [Homo sapiens]
Length = 152
Score = 307 bits (786), Expect = 8e-83
Identities = 148/151 (98%), Positives = 149/151 (98%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPF DGTFKL +EFT
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFGDGTFKLTIEFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 507
PANSQAAQLYQENKREYEKRVSAIVEQSWRD
Sbjct: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 151
>gi|4507771|ref|NP_003328.1| ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Homo sapiens]
gi|6678485|ref|NP_033484.1| ubiquitin-conjugating enzyme E2B (RAD6 homology) [Mus musculus]
gi|13592123|ref|NP_112400.1| ubiquitin conjugating enzyme [Rattus norvegicus]
gi|16160535|ref|XP_057745.1| hypothetical protein XP_057745 [Homo sapiens]
gi|16160538|ref|XP_004044.4| ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Homo sapiens]
gi|16160540|ref|XP_057744.1| hypothetical protein XP_057744 [Homo sapiens]
gi|136638|sp|P23567|UBC2_HUMAN UBIQUITIN-CONJUGATING ENZYME E2-17 KDA (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN) (HR6B)
gi|108017|pir||B41222 ubiquitin--protein ligase (EC 6.3.2.19) E2B - human
gi|284677|pir||A42416 ubiquitin carrier protein E2 - rabbit
gi|2143552|pir||I51913 14 kDa ubiquitin conjugating enzyme - rat
gi|30954|emb|CAA37339.1| (X53251) E2 protein [Homo sapiens]
gi|165780|gb|AAA31492.1| (M62387) ubiquitin conjugating-protein [Oryctolagus cuniculus]
gi|184046|gb|AAA35982.1| (M74525) HHR6B (Human homologue of yeast RAD 6); putative [Homo
sapiens]
gi|207555|gb|AAA21087.1| (M62388) ubiquitin conjugating-protein [Rattus norvegicus]
gi|476117|gb|AAB60669.1| (U04308) 14 kDa ubiquitin conjugating enzyme [Rattus norvegicus]
gi|1237240|emb|CAA65602.1| (X96859) ubiquitin-conjugating enzym [Mus musculus]
gi|1373353|gb|AAC52884.1| (U57690) E214K [Mus musculus]
gi|5019992|gb|AAD37966.1|AF144083_1 (AF144083) ubiquitin-conjugating enzyme [Rattus norvegicus]
gi|11037550|gb|AAG27628.1| (AF294392) ubiquitin-conjugating enzyme HR6B [Homo sapiens]
gi|12845872|dbj|BAB26934.1| (AK010432) putative [Mus musculus]
gi|13543660|gb|AAH05979.1|AAH05979 (BC005979) ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Homo
sapiens]
gi|14250016|gb|AAH08404.1|AAH08404 (BC008404) ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Homo
sapiens]
gi|14250116|gb|AAH08470.1|AAH08470 (BC008470) ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Homo
sapiens]
gi|745378|prf||2016220A ubiquitin-conjugating enzyme:ISOTYPE=E2-14k [Rattus norvegicus]
Length = 152
Score = 304 bits (779), Expect = 5e-82
Identities = 145/152 (95%), Positives = 149/152 (97%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKRLQEDPP GVSGAPSENNIM WNAVIFGPEGTPFEDGTFKL++EF+
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPPTVRF+SKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRDS 510
PANSQAAQLYQENKREYEKRVSAIVEQSW DS
Sbjct: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS 152
>gi|12847438|dbj|BAB27570.1| (AK011363) putative [Mus musculus]
Length = 152
Score = 302 bits (774), Expect = 2e-81
Identities = 144/152 (94%), Positives = 148/152 (96%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPAR RLMRDFKRLQEDPP GVSGAPSENNIM WNAVIFGPEGTPFEDGTFKL++EF+
Sbjct: 1 MSTPARERLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPPTVRF+SKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRDS 510
PANSQAAQLYQENKREYEKRVSAIVEQSW DS
Sbjct: 121 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS 152
>gi|106346|pir||S17516 hypothetical protein - human
Length = 151
Score = 294 bits (752), Expect = 7e-79
Identities = 142/152 (93%), Positives = 147/152 (96%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKRLQEDPP VSGAPSENNIM WNAVI GPEGTPFEDGTF+L++EF+
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPC-VSGAPSENNIMQWNAVIIGPEGTPFEDGTFRLVIEFS 59
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPPTVRF+SKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS
Sbjct: 60 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 119
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRDS 510
PANSQAAQLYQENKREYEKRVSAIVEQSW DS
Sbjct: 120 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS 151
>gi|14286180|sp|P25153|UBC6_DROME UBIQUITIN-CONJUGATING ENZYME E2-17 KDA (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN)
gi|7296802|gb|AAF52079.1| (AE003604) UbcD6 gene product [Drosophila melanogaster]
Length = 151
Score = 278 bits (710), Expect = 5e-74
Identities = 131/151 (86%), Positives = 141/151 (92%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKRLQEDPP GVSGAP++NNIM+WNAVIFGP TPFEDGTFKL +EFT
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPPTVRFVSK+FHPNVYADG ICLDILQNRWSPTYDVS+ILTSIQSLL +PNPNS
Sbjct: 61 EEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 507
PANS AAQLY+EN+REYEKRV A VEQS+ D
Sbjct: 121 PANSTAAQLYKENRREYEKRVKACVEQSFID 151
>gi|1717853|sp|P52478|UBC1_CAEEL UBIQUITIN-CONJUGATING ENZYME E2-21.5 KD (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN)
gi|506644|gb|AAA83388.1| (U08139) similar to yeast RAD6 DNA repair protein, Swiss-Prot
Accession Number P06104 [Caenorhabditis elegans]
gi|14573896|gb|AAC02561.2| (AF045638) Hypothetical protein C35B1.1 [Caenorhabditis elegans]
Length = 192
Score = 277 bits (708), Expect = 9e-74
Identities = 128/149 (85%), Positives = 142/149 (94%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
M+TP+RRRLMRDFK+LQEDPPAGVSGAP+E+NI+ W A+IFGP+ TPFEDGTFKL +EFT
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPPTV+F+SKMFHPNVYADGSICLDILQNRWSPTYDV++ILTSIQSLLDEPNPNS
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PANS AAQLYQEN+REYEKRV IVEQSW
Sbjct: 121 PANSLAAQLYQENRREYEKRVQQIVEQSW 149
>gi|103350|pir||A39392 RAD6 DNA-repair homolog Dhr6 - fruit fly (Drosophila melanogaster)
gi|156732|gb|AAA28308.1| (M63792) DHR6 [Drosophila melanogaster]
gi|156736|gb|AAA28309.1| (M64435) DHR6 [Drosophila melanogaster]
Length = 151
Score = 275 bits (704), Expect = 3e-73
Identities = 130/151 (86%), Positives = 140/151 (92%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKRLQEDPP GVSGAP++NNIM+WNAVIFGP TPFEDGTFKL +EFT
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPPTVRFVSK+FHPNVYADG ICLDILQNRWSP YDVS+ILTSIQSLL +PNPNS
Sbjct: 61 EEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPRYDVSAILTSIQSLLSDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 507
PANS AAQLY+EN+REYEKRV A VEQS+ D
Sbjct: 121 PANSTAAQLYKENRREYEKRVKACVEQSFID 151
>gi|7497060|pir||T32959 hypothetical protein C35B1.1 - Caenorhabditis elegans
Length = 205
Score = 268 bits (684), Expect = 6e-71
Identities = 128/162 (79%), Positives = 142/162 (87%), Gaps = 13/162 (8%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQ-------------EDPPAGVSGAPSENNIMVWNAVIFGPEGTP 195
M+TP+RRRLMRDFK+LQ EDPPAGVSGAP+E+NI+ W A+IFGP+ TP
Sbjct: 1 MTTPSRRRLMRDFKKLQKKLDIFGIFDKFLEDPPAGVSGAPTEDNILTWEAIIFGPQETP 60
Query: 196 FEDGTFKLIVEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILT 375
FEDGTFKL +EFTEEYPNKPPTV+F+SKMFHPNVYADGSICLDILQNRWSPTYDV++ILT
Sbjct: 61 FEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILT 120
Query: 376 SIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 501
SIQSLLDEPNPNSPANS AAQLYQEN+REYEKRV IVEQSW
Sbjct: 121 SIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSW 162
>gi|8118527|gb|AAF73016.1|AF262934_1 (AF262934) ubiquitin conjugating protein [Avicennia marina]
Length = 152
Score = 259 bits (663), Expect = 2e-68
Identities = 116/149 (77%), Positives = 139/149 (92%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPAR+RLMRDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKL ++FT
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YD+++ILTSIQSLL +PNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PANS+AA+++ ENKREY +RV IVEQSW
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSW 149
>gi|7108763|gb|AAF36529.1|AF132074_1 (AF132074) RAD6 homolog [Equus caballus]
Length = 126
Score = 259 bits (663), Expect = 2e-68
Identities = 123/126 (97%), Positives = 125/126 (98%)
Frame = +1
Query: 82 MRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYPNKPPT 261
+RDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKL +EFTEEYPNKPPT
Sbjct: 1 LRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPT 60
Query: 262 VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 441
VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL
Sbjct: 61 VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 120
Query: 442 YQENKR 459
YQENKR
Sbjct: 121 YQENKR 126
>gi|7108761|gb|AAF36528.1|AF132073_1 (AF132073) RAD6 homolog [Sus scrofa]
Length = 126
Score = 258 bits (660), Expect = 3e-68
Identities = 123/126 (97%), Positives = 124/126 (97%)
Frame = +1
Query: 82 MRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYPNKPPT 261
MRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKL +E TEEYPNKPPT
Sbjct: 1 MRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIELTEEYPNKPPT 60
Query: 262 VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 441
VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL
Sbjct: 61 VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 120
Query: 442 YQENKR 459
YQENKR
Sbjct: 121 YQENKR 126
>gi|136640|sp|P25866|UBC2_WHEAT UBIQUITIN-CONJUGATING ENZYME E2-17 KD (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN)
gi|170785|gb|AAA34310.1| (M62720) ubiquitin carrier protein [Triticum aestivum]
Length = 152
Score = 257 bits (657), Expect = 8e-68
Identities = 115/149 (77%), Positives = 138/149 (92%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPAR+RLMRDFKRLQ+DPPAG+SGAP +NNI +WNAVIFGP+ TP++ GTFKL ++FT
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PANS+AA++Y ENKREY ++V +VEQSW
Sbjct: 121 PANSEAARMYSENKREYNRKVREVVEQSW 149
>gi|7108765|gb|AAF36530.1|AF132075_1 (AF132075) RAD6 homolog [Bos taurus]
Length = 124
Score = 257 bits (656), Expect = 1e-67
Identities = 122/124 (98%), Positives = 123/124 (98%)
Frame = +1
Query: 85 RDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYPNKPPTV 264
RDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKL +EFTEEYPNKPPTV
Sbjct: 1 RDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTV 60
Query: 265 RFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 444
RFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLY
Sbjct: 61 RFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 120
Query: 445 QENK 456
QENK
Sbjct: 121 QENK 124
>gi|15223746|ref|NP_172892.1| ubiquitin carrier protein, putative [Arabidopsis thaliana]
gi|136636|sp|P25865|UBC1_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KD 1 (UBIQUITIN-PROTEIN LIGASE
1) (UBIQUITIN CARRIER PROTEIN 1)
gi|1076424|pir||S43781 ubiquitin-conjugating enzyme UBC1 - Arabidopsis thaliana
gi|2981894|pdb|2AAK| Ubiquitin Conjugating Enzyme From Arabidopsis Thaliana
gi|166924|gb|AAA32903.1| (M62721) ubiquitin carrier protein [Arabidopsis thaliana]
gi|431260|gb|AAA32897.1| (L19351) ubiquitin conjugating enzyme [Arabidopsis thaliana]
gi|7262682|gb|AAF43940.1|AC012188_17 (AC012188) Strong similarity to a Ubiquitin-conjugating Enzyme
(E2-17 KD 1) from Arabidopsis thaliana gi|136636 and
contains a Ubiqutin-conjugating Enzyme PF|00179 domain.
ESTs gb|AA728508, gb|H36735, gb|AI100736 come from this
gene.
gi|12083310|gb|AAG48814.1|AF332451_1 (AF332451) putative ubiquitin-conjugating enzyme protein
[Arabidopsis thaliana]
Length = 152
Score = 257 bits (656), Expect = 1e-67
Identities = 115/149 (77%), Positives = 139/149 (93%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPAR+RLMRDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKL ++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PANS+AA++Y E+KREY +RV +VEQSW
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSW 149
>gi|464980|sp|P35130|UBC2_MEDSA UBIQUITIN-CONJUGATING ENZYME E2-17 KD (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN)
gi|166422|gb|AAA18528.1| (L06967) ubiquitin carrier protein [Medicago sativa]
Length = 152
Score = 257 bits (656), Expect = 1e-67
Identities = 115/149 (77%), Positives = 138/149 (92%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPAR+RLMRDFKRLQ DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKL ++F+
Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PANS+AA+++ ENKREY +RV +VEQSW
Sbjct: 121 PANSEAARMFSENKREYNRRVREVVEQSW 149
>gi|13516451|dbj|BAB40310.1| (AB026055) ubiquitin-conjugating enzyme (E2) [Nicotiana tabacum]
Length = 152
Score = 256 bits (654), Expect = 2e-67
Identities = 114/149 (76%), Positives = 139/149 (92%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPAR+RLMRDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKL ++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPYDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPPTVRF+S+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNS
Sbjct: 61 EDYPNKPPTVRFISRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PANS+AA+++ ENKREY ++V IVEQSW
Sbjct: 121 PANSEAARMFSENKREYNRKVREIVEQSW 149
>gi|15227030|ref|NP_178379.1| putative ubiquitin-conjugating enzyme E2 [Arabidopsis thaliana]
gi|1174844|sp|P42745|UBC2_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 2 (UBIQUITIN-PROTEIN LIGASE
2) (UBIQUITIN CARRIER PROTEIN 2)
gi|1076426|pir||S43783 ubiquitin-conjugating enzyme UBC2 - Arabidopsis thaliana
gi|431264|gb|AAA32899.1| (L19353) ubiquitin conjugating enzyme [Arabidopsis thaliana]
gi|2689243|emb|CAA73476.1| (Y13031) ubiquitin conjugating enzyme [Arabidopsis thaliana]
gi|2947065|gb|AAC05346.1| (AC002521) putative ubiquitin-conjugating enzyme E2 [Arabidopsis
thaliana]
gi|13899127|gb|AAK48985.1|AF370558_1 (AF370558) putative ubiquitin-conjugating enzyme E2 [Arabidopsis
thaliana]
Length = 152
Score = 256 bits (653), Expect = 2e-67
Identities = 114/149 (76%), Positives = 139/149 (92%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPAR+RLMRDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKL ++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PANS+AA+++ E+KREY +RV +VEQSW
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSW 149
>gi|16152184|gb|AAL14998.1|AF419316_1 (AF419316) RAD6-like protein HR6A [Bos taurus]
Length = 124
Score = 255 bits (651), Expect = 4e-67
Identities = 121/124 (97%), Positives = 123/124 (98%)
Frame = +1
Query: 85 RDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYPNKPPTV 264
RDFKRLQEDPPAGVSGAPSEN+IMVWNAVIFGPEGTPFEDGTFKL +EFTEEYPNKPPTV
Sbjct: 1 RDFKRLQEDPPAGVSGAPSENDIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTV 60
Query: 265 RFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 444
RFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLY
Sbjct: 61 RFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 120
Query: 445 QENK 456
QENK
Sbjct: 121 QENK 124
>gi|13516453|dbj|BAB40311.1| (AB026056) ubiquitin-conjugating enzyme (E2) [Nicotiana tabacum]
Length = 152
Score = 254 bits (650), Expect = 5e-67
Identities = 113/149 (75%), Positives = 139/149 (92%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPAR+RL+RDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKL ++F+
Sbjct: 1 MSTPARKRLVRDFKRLQQDPPAGISGAPYDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPPTVRF+S+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNS
Sbjct: 61 EDYPNKPPTVRFISRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PANS+AA+++ ENKREY ++V IVEQSW
Sbjct: 121 PANSEAARMFSENKREYNRKVREIVEQSW 149
>gi|15241864|ref|NP_201060.1| ubiquitin-conjugating enzyme E2-17 kd 3 (ubiquitin-protein ligase
3) (ubiquitin carrier protein 3)-like protein
(sp|P42746) [Arabidopsis thaliana]
gi|1174846|sp|P42746|UBC3_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KD 3 (UBIQUITIN-PROTEIN LIGASE
3) (UBIQUITIN CARRIER PROTEIN 3)
gi|1076425|pir||S43782 ubiquitin-conjugating enzyme UBC3 - Arabidopsis thaliana
gi|431262|gb|AAA32898.1| (L19352) ubiquitin conjugating enzyme [Arabidopsis thaliana]
gi|10178085|dbj|BAB11504.1| (AB015469) ubiquitin-conjugating enzyme E2-17 kd 3
(ubiquitin-protein ligase 3) (ubiquitin carrier protein
3)-like protein [Arabidopsis thaliana]
gi|14532454|gb|AAK63955.1| (AY039851) AT5g62540/K19B1_15 [Arabidopsis thaliana]
Length = 150
Score = 240 bits (613), Expect = 9e-63
Identities = 108/149 (72%), Positives = 134/149 (89%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
M+TPA++RLM DFKRLQ+DPP G+SGAP +NNIM WNA+IFGPE TP++ GTFKL + FT
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPP VRFVS+MFHPN+YADGSICLDILQN+WSP YDV+++LTSIQSLL +PNP+S
Sbjct: 61 EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PAN++AA+L+ ENKREY ++V IVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149
>gi|1174845|sp|P23566|UBC2_SCHPO UBIQUITIN-CONJUGATING ENZYME E2-17 KDA (UBIQUITIN-PROTEIN LIGASE 2)
(UBIQUITIN CARRIER PROTEIN) (RAD6 HOMOLOG)
gi|101070|pir||S12529 ubiquitin-conjugating enzyme rhp6 - fission yeast
(Schizosaccharomyces pombe)
gi|929893|emb|CAA90592.1| (Z50728) ubiquitin-conjugating enzyme e2-17 kd [Schizosaccharomyces
pombe]
Length = 151
Score = 237 bits (604), Expect = 1e-61
Identities = 108/149 (72%), Positives = 130/149 (86%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MST ARRRLMRDFKR+Q+DPPAGVS +P +N+M+WNAVI GP TPFEDGTFKL++ F
Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFD 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPP V+FVS MFHPNVYA+G +CLDILQNRWSPTYDV++ILTSIQSLL++PN S
Sbjct: 61 EQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNAS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PAN++AAQL++ENK+EY +RV VE SW
Sbjct: 121 PANAEAAQLHRENKKEYVRRVRKTVEDSW 149
>gi|11272418|pir||T45220 ubiquitin--protein ligase (EC 6.3.2.19) rhp6 [imported] - fission
yeast (Schizosaccharomyces pombe)
gi|5046|emb|CAA37340.1| (X53252) rhp6+ [Schizosaccharomyces pombe]
Length = 151
Score = 235 bits (599), Expect = 4e-61
Identities = 107/149 (71%), Positives = 129/149 (85%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MST ARRRLMRDFKR+Q+DPPAGVS +P +N+M+WNAVI GP TPFEDGTFKL++ F
Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFD 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPP V+FVS MFHPNVYA+G +CLDILQNRWSPTYDV++ILTSIQ LL++PN S
Sbjct: 61 EQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQRLLNDPNNAS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PAN++AAQL++ENK+EY +RV VE SW
Sbjct: 121 PANAEAAQLHRENKKEYVRRVRKTVEDSW 149
>gi|1717855|sp|P52493|UBC2_NEUCR UBIQUITIN-CONJUGATING ENZYME E2-17 KD (UBIQUITIN-PROTEIN LIGASE 2)
(UBIQUITIN CARRIER PROTEIN)
gi|7437985|pir||S71430 DNA repair protein mus-8 - Neurospora crassa
gi|1100729|dbj|BAA11380.1| (D78372) mus-8 [Neurospora crassa]
Length = 151
Score = 235 bits (599), Expect = 4e-61
Identities = 104/151 (68%), Positives = 129/151 (84%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MST ARRRLMRDFKR+Q DPPAGVS +P +N+M WNAVI GP TPFEDGTF+L++ F
Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFE 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPP+V+F+S+MFHPNVYA G +CLDILQNRWSPTYDV+++LTSIQSLL++PN S
Sbjct: 61 EQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 507
PAN +A+ LY++N++EY KRV VE+SW D
Sbjct: 121 PANVEASNLYKDNRKEYHKRVRETVEKSWED 151
>gi|1816660|gb|AAB47850.1| (U86521) NhRAD6 [Haematonectria haematococca]
Length = 151
Score = 234 bits (598), Expect = 5e-61
Identities = 104/151 (68%), Positives = 129/151 (84%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MST ARRRLMRDFKR+Q DPPAGVS +P +N+M WNAVI GP TPFEDGTF+L+++F
Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFE 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPP V+F+S+MFHPNVYA G +CLDILQNRWSPTYDV+++LTSIQSLL++PN S
Sbjct: 61 EQYPNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 507
PAN +A+ LY++N++EY KRV VE+SW D
Sbjct: 121 PANVEASNLYKDNRKEYTKRVRETVEKSWED 151
>gi|15081749|gb|AAK82529.1| (AY048267) AT5g62540/K19B1_15 [Arabidopsis thaliana]
Length = 146
Score = 234 bits (596), Expect = 9e-61
Identities = 105/146 (71%), Positives = 130/146 (88%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
M+TPA++RLM D KRLQ+DPP G+SGAP +NNIM WNA+IFGPE TP++ GTFKL + FT
Sbjct: 1 MTTPAKKRLMWDLKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPP VRFVS+MFHPN+YADGSICLDILQN+WSP YDV+++LTSIQSLL +PNP+S
Sbjct: 61 EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVE 492
PAN++AA+L+ ENKREY ++V IVE
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVE 146
>gi|3659954|pdb|1AYZ|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae
Ubiquitin-Conjugating Enzyme Rad6 (Ubc2) At 2.6a
Resolution
gi|3659955|pdb|1AYZ|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae
Ubiquitin-Conjugating Enzyme Rad6 (Ubc2) At 2.6a
Resolution
gi|3659956|pdb|1AYZ|C Chain C, Crystal Structure Of The Saccharomyces Cerevisiae
Ubiquitin-Conjugating Enzyme Rad6 (Ubc2) At 2.6a
Resolution
Length = 169
Score = 233 bits (594), Expect = 2e-60
Identities = 106/156 (67%), Positives = 132/156 (83%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKR++ED P GVS +P +N+MVWNA+I GP TP+EDGTF+L++EF
Sbjct: 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFD 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPP V+F+S+MFHPNVYA+G ICLDILQNRW+PTYDV+SILTSIQSL ++PNP S
Sbjct: 61 EEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPAS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRDS*PDN 522
PAN +AA L++++K +Y KRV VE+SW D D+
Sbjct: 121 PANVEAATLFKDHKSQYVKRVKETVEKSWEDDMDDD 156
>gi|6136093|sp|O74201|UBC2_CANAL UBIQUITIN-CONJUGATING ENZYME E2-20 KDA (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN)
gi|3273562|gb|AAC24765.1| (AF036707) RAD6 [Candida albicans]
gi|5565868|gb|AAD45241.1| (AF118145) RAD6 [Candida albicans]
Length = 179
Score = 233 bits (593), Expect = 2e-60
Identities = 105/151 (69%), Positives = 128/151 (84%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKR+Q+DPP+GVS +P +N+M WNAVI GP TPFEDGTF+L++ F
Sbjct: 1 MSTPARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFD 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
E+YPNKPP V+F+S+MFHPNVYA G +CLDILQNRWSPTYDVSSILTS+QSLL++PN +S
Sbjct: 61 EQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 507
PAN +AA LY++++ Y KRV VE SW D
Sbjct: 121 PANVEAANLYKDHRSLYVKRVRETVENSWND 151
>gi|6321380|ref|NP_011457.1| Involved in DNA repair and sporulation. Rad6p interacts with Ubr1
and Rad18p. mRNA is induced early in meiosis and peaks
at meiosis I.; Rad6p [Saccharomyces cerevisiae]
gi|136641|sp|P06104|UBC2_YEAST UBIQUITIN-CONJUGATING ENZYME E2-20 KD (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN)
gi|83451|pir||A21906 ubiquitin-conjugating enzyme RAD6 - yeast (Saccharomyces
cerevisiae)
gi|172349|gb|AAA34952.1| (K02962) RAD6 protein [Saccharomyces cerevisiae]
gi|1322558|emb|CAA96761.1| (Z72580) ORF YGL058w [Saccharomyces cerevisiae]
Length = 172
Score = 233 bits (593), Expect = 2e-60
Identities = 106/155 (68%), Positives = 131/155 (84%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MSTPARRRLMRDFKR++ED P GVS +P +N+MVWNA+I GP TP+EDGTF+L++EF
Sbjct: 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFD 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYPNKPP V+F+S+MFHPNVYA+G ICLDILQNRW+PTYDV+SILTSIQSL ++PNP S
Sbjct: 61 EEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPAS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSWRDS*PD 519
PAN +AA L++++K +Y KRV VE+SW D D
Sbjct: 121 PANVEAATLFKDHKSQYVKRVKETVEKSWEDDMDD 155
>gi|6010087|emb|CAB57250.1| (AJ270223) putative ubiquitin carrier [Entodinium caudatum]
Length = 186
Score = 176 bits (446), Expect = 2e-43
Identities = 81/147 (55%), Positives = 112/147 (76%), Gaps = 3/147 (2%)
Frame = +1
Query: 67 ARRRLMRDFKRL---QEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTE 237
A++RL+ DFKR+ Q++ V P E++IM+W+ +IFGPE + +E+G FKL +EF+E
Sbjct: 31 AKKRLLTDFKRINQSQDNDDESVLATPHEDDIMIWDCIIFGPENSVWENGVFKLKMEFSE 90
Query: 238 EYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSP 417
EYPNKPP V +K+FHPN Y +G IC+DIL+++WSP YD+ SILTSIQSLL +PNP SP
Sbjct: 91 EYPNKPPHVLMKTKVFHPNFYVNGEICIDILKDQWSPIYDIKSILTSIQSLLTDPNPASP 150
Query: 418 ANSQAAQLYQENKREYEKRVSAIVEQS 498
AN +AA+LY +N +EY K+V VE+S
Sbjct: 151 ANVEAAKLYSDNIQEYNKKVKECVEKS 177
>gi|7768300|emb|CAB11153.2| (Z98551) putative ubiquitin-conjugating enzyme [Plasmodium
falciparum]
Length = 160
Score = 173 bits (438), Expect = 2e-42
Identities = 79/149 (53%), Positives = 112/149 (75%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MST ARRR+++D ++ ++ +P +NIM +A+I GP+ T +E G F LI+ F+
Sbjct: 1 MSTFARRRIIQDLNKINKEKNKSFEASPFADNIMYCHAIIRGPDDTIWECGIFHLIIHFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYP PP +RF+SK++HPN+Y+DG+ICLDILQN+WSP YD++SILTSIQSLL++PN +S
Sbjct: 61 EEYPVSPPKLRFLSKIYHPNIYSDGNICLDILQNQWSPIYDITSILTSIQSLLNDPNTSS 120
Query: 415 PANSQAAQLYQENKREYEKRVSAIVEQSW 501
PAN +AA+++ N+ Y KRV VE SW
Sbjct: 121 PANPEAARIFINNRNLYNKRVLMCVEDSW 149
>gi|7494269|pir||T18512 hypothetical protein C0855w - malaria parasite (Plasmodium
falciparum)
Length = 157
Score = 165 bits (418), Expect = 4e-40
Identities = 75/141 (53%), Positives = 108/141 (76%)
Frame = +1
Query: 55 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFT 234
MST ARRR+++D ++ ++ +P +NIM +A+I GP+ T +E G F LI+ F+
Sbjct: 1 MSTFARRRIIQDLNKINKEKNKSFEASPFADNIMYCHAIIRGPDDTIWECGIFHLIIHFS 60
Query: 235 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 414
EEYP PP +RF+SK++HPN+Y+DG+ICLDILQN+WSP YD++SILTSIQSLL++PN +S
Sbjct: 61 EEYPVSPPKLRFLSKIYHPNIYSDGNICLDILQNQWSPIYDITSILTSIQSLLNDPNTSS 120
Query: 415 PANSQAAQLYQENKREYEKRV 477
PAN +AA+++ N+ Y KRV
Sbjct: 121 PANPEAARIFINNRNLYNKRV 141
>gi|11907996|gb|AAG41428.1| (AF316536) ubiquitin-conjugating enzyme RAD6 [Bos taurus]
Length = 76
Score = 154 bits (390), Expect = 7e-37
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +1
Query: 283 FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 462
FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE
Sbjct: 1 FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 60
Query: 463 YEKRVSAIVEQSWRD 507
YE RVSAIVEQSWRD
Sbjct: 61 YENRVSAIVEQSWRD 75
>gi|12718396|emb|CAC28704.1| (AL513444) probable ubiquitin-conjugating enzyme ubcP3 [Neurospora
crassa]
Length = 166
Score = 144 bits (362), Expect = 1e-33
Identities = 68/158 (43%), Positives = 100/158 (63%), Gaps = 14/158 (8%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAP-SENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEY 243
A+RRL+++++ L +PP G++ P SE++++ W +I GPEGTPFE G F ++F +Y
Sbjct: 6 AQRRLLQEYRALTNNPPEGITAGPISEDDLLHWECLIQGPEGTPFEGGVFPAELKFPNDY 65
Query: 244 PNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQ 384
P+ PPT++F+ +FHPNVY G +C+ IL RWSP V IL S+
Sbjct: 66 PHMPPTMKFLGDIFHPNVYPSGLVCISILHPPGDDPNHYETASERWSPIQSVEKILLSVM 125
Query: 385 SLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 498
S+L EPN SPAN +AA++++E + EYE RV A V S
Sbjct: 126 SMLAEPNDESPANVEAAKMWREKRSEYEARVKASVRAS 163
>gi|13811942|ref|NP_113070.1| ubiquitin conjugating enzyme [Guillardia theta]
gi|13812084|ref|NP_113222.1| ubiquitin conjugating enzyme [Guillardia theta]
gi|13812106|ref|NP_113233.1| ubiquitin conjugating enzyme [Guillardia theta]
gi|13812275|ref|NP_113393.1| ubiquitin conjugating enzyme [Guillardia theta]
gi|13812426|ref|NP_113544.1| ubiquitin conjugating enzyme [Guillardia theta]
gi|6690139|gb|AAF24004.1|AF083031_1 (AF083031) ubiquitin conjugating enzyme [Guillardia theta]
gi|6690600|gb|AAF24208.1|AF165818_1 (AF165818) ubiquitin conjugating enzyme [Guillardia theta]
gi|12580660|emb|CAC26977.1| (AJ010592) ubiquitin conjugating enzyme [Guillardia theta]
gi|12580795|emb|CAC27113.1| (AJ010592) ubiquitin conjugating enzyme [Guillardia theta]
gi|13794402|gb|AAK39779.1|AF083031_143 (AF083031) ubiquitin conjugating enzyme [Guillardia theta]
Length = 147
Score = 139 bits (349), Expect = 4e-32
Identities = 60/134 (44%), Positives = 91/134 (67%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R+ ++ K L +DPP+ S PS+ N+ W A I GP +P+ G F L + F +YP
Sbjct: 2 ATKRIQKEHKDLLKDPPSNCSAGPSDENLFRWTASIIGPSDSPYAGGVFFLSILFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V+F +K++HPN+ ++GSICLDIL+++WSP VS +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVQFTTKIYHPNINSNGSICLDILRDQWSPALTVSKVLLSISSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A++++EN+ YE
Sbjct: 122 EIARVFKENRSRYE 135
>gi|15234339|ref|NP_194525.1| ubiquitin-protein ligase UBC9 [Arabidopsis thaliana]
gi|464986|sp|P35132|UBC9_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KD 9 (UBIQUITIN-PROTEIN LIGASE
9) (UBIQUITIN CARRIER PROTEIN 9) (UBCAT4B)
gi|421857|pir||S32674 ubiquitin--protein ligase (EC 6.3.2.19) UBC9 - Arabidopsis thaliana
gi|297884|emb|CAA78714.1| (Z14990) ubiquitin conjugating enzyme homolog [Arabidopsis
thaliana]
gi|349211|gb|AAA32894.1| (L00639) ubiquitin conjugating enzyme [Arabidopsis thaliana]
gi|600391|emb|CAA51201.1| (X72626) ubiquitin conjugating enzyme E2 [Arabidopsis thaliana]
gi|4455355|emb|CAB36765.1| (AL035524) ubiquitin-protein ligase UBC9 [Arabidopsis thaliana]
gi|7269650|emb|CAB79598.1| (AL161572) ubiquitin-protein ligase UBC9 [Arabidopsis thaliana]
Length = 148
Score = 135 bits (339), Expect = 6e-31
Identities = 58/134 (43%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ +K +YE
Sbjct: 122 EIAHMYKTDKNKYE 135
>gi|11762186|gb|AAG40371.1|AF325019_1 (AF325019) AT4g27960 [Arabidopsis thaliana]
Length = 178
Score = 135 bits (339), Expect = 6e-31
Identities = 58/134 (43%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 92 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ +K +YE
Sbjct: 152 EIAHMYKTDKNKYE 165
>gi|15227290|ref|NP_179265.1| putative ubiquitin-conjugating enzyme E2 [Arabidopsis thaliana]
gi|4581117|gb|AAD24607.1|AC005825_14 (AC005825) putative ubiquitin-conjugating enzyme E2 [Arabidopsis
thaliana]
Length = 148
Score = 134 bits (337), Expect = 1e-30
Identities = 58/134 (43%), Positives = 88/134 (65%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A RR++++ K LQ DPP S P+ ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++G+ICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ +K +YE
Sbjct: 122 EIAHIYKTDKTKYE 135
>gi|15238706|ref|NP_200142.1| ubiquitin-conjugating enzyme E2-17 kD 10 (ubiquitin-protein ligase
10) (ubiquitin carrier protein 10) (sp|P35133)
[Arabidopsis thaliana]
gi|464987|sp|P35133|UBCA_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KD 10 (UBIQUITIN-PROTEIN LIGASE
10) (UBIQUITIN CARRIER PROTEIN 10)
gi|421858|pir||S32672 ubiquitin--protein ligase (EC 6.3.2.19) UBC10 - Arabidopsis
thaliana
gi|297878|emb|CAA78715.1| (Z14991) ubiquitin conjugating enzyme [Arabidopsis thaliana]
gi|349213|gb|AAA32895.1| (L00640) ubiquitin conjugating enzyme [Arabidopsis thaliana]
gi|9759177|dbj|BAB09792.1| (AB013388) ubiquitin-conjugating enzyme E2-17 kD 10
(ubiquitin-protein ligase 10) (ubiquitin carrier protein
10) [Arabidopsis thaliana]
gi|11692932|gb|AAG40069.1|AF324718_1 (AF324718) AT5g53300 [Arabidopsis thaliana]
gi|11762158|gb|AAG40357.1|AF325005_1 (AF325005) AT5g53300 [Arabidopsis thaliana]
gi|11908050|gb|AAG41454.1|AF326872_1 (AF326872) putative ubiquitin-conjugating enzyme E2-17 kD
10(ubiquitin-protein ligase 10)(ubiquitin carrier
protein10) [Arabidopsis thaliana]
gi|14517462|gb|AAK62621.1| (AY039566) AT5g53300/K19E1_10 [Arabidopsis thaliana]
Length = 148
Score = 134 bits (337), Expect = 1e-30
Identities = 58/134 (43%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ +K +YE
Sbjct: 122 EIAHMYKTDKNKYE 135
>gi|14326529|gb|AAK60309.1|AF385718_1 (AF385718) At1g64230/F22C12_17 [Arabidopsis thaliana]
Length = 148
Score = 134 bits (336), Expect = 1e-30
Identities = 58/134 (43%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPNV ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ ++ +YE
Sbjct: 122 EIAHMYKTDRAKYE 135
>gi|441457|emb|CAA51821.1| (X73419) ubiquitin conjugating enzyme E2 [Lycopersicon esculentum]
Length = 148
Score = 133 bits (334), Expect = 2e-30
Identities = 57/134 (42%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYSGGVFLVTIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ ++ +YE
Sbjct: 122 EIAHMYKTDRSKYE 135
>gi|5762457|gb|AAD51109.1|AF176040_1 (AF176040) ubiquitin-conjugating enzyme UBC2 [Mesembryanthemum
crystallinum]
Length = 148
Score = 133 bits (334), Expect = 2e-30
Identities = 58/134 (43%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGLFLVTIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ +K +YE
Sbjct: 122 EIAHMYKTDKGKYE 135
>gi|15238155|ref|NP_198985.1| ubiquitin-conjugating enzyme E2-17 kD 8 (ubiquitin-protein ligase
8) (ubiquitin carrier protein 8) (sp|P35131)
[Arabidopsis thaliana]
gi|464985|sp|P35131|UBC8_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KD 8 (UBIQUITIN-PROTEIN LIGASE
8) (UBIQUITIN CARRIER PROTEIN 8) (UBCAT4A)
gi|398699|emb|CAA78713.1| (Z14989) ubiquitin conjugating enzyme homolog [Arabidopsis
thaliana]
gi|10178024|dbj|BAB11476.1| (AB005233) ubiquitin-conjugating enzyme E2-17 kD 8
(ubiquitin-protein ligase 8) (ubiquitin carrier protein
8) [Arabidopsis thaliana]
gi|11762166|gb|AAG40361.1|AF325009_1 (AF325009) AT5g41700 [Arabidopsis thaliana]
gi|13877989|gb|AAK44072.1|AF370257_1 (AF370257) putative ubiquitin-conjugating enzyme [Arabidopsis
thaliana]
gi|15451030|gb|AAK96786.1| (AY054595) ubiquitin-conjugating enzyme E2-17 kD 8
(ubiquitin-protein ligase 8) (ubiquitin carrier protein
8) [Arabidopsis thaliana]
gi|16323055|gb|AAL15262.1| (AY057631) AT5g41700/MBK23_24 [Arabidopsis thaliana]
Length = 148
Score = 132 bits (333), Expect = 3e-30
Identities = 57/134 (42%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ ++ +YE
Sbjct: 122 EIAHMYKTDRAKYE 135
>gi|2668744|gb|AAB88617.1| (AF034946) ubiquitin conjugating enzyme [Zea mays]
Length = 148
Score = 132 bits (333), Expect = 3e-30
Identities = 57/134 (42%), Positives = 88/134 (65%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P+ ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ ++ +YE
Sbjct: 122 EIAHMYKTDRPKYE 135
>gi|13386314|ref|NP_082778.1| RIKEN cDNA 1700013N18 gene [Mus musculus]
gi|13591896|ref|NP_112263.1| ubiquitin-conjugating enzyme E2D 2 [Rattus norvegicus]
gi|2501431|sp|P70711|UB5D_RAT UBIQUITIN-CONJUGATING ENZYME E2-17 KD 4 (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN) (E2(17)KB 4)
gi|1515423|gb|AAC52942.1| (U56407) Ubiquitin conjugating enzyme [Rattus norvegicus]
gi|12838829|dbj|BAB24345.1| (AK005969) putative [Mus musculus]
Length = 147
Score = 132 bits (332), Expect = 4e-30
Identities = 57/135 (42%), Positives = 89/135 (65%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R+ ++ L +DPPA S P ++ W A I GP +P++ G F L ++F EYP
Sbjct: 2 ALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F ++++HPNV ++GSICLDIL+++WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYEK 471
+ AQ+Y+ ++ +Y +
Sbjct: 122 EIAQIYKTDRDKYNR 136
>gi|456568|gb|AAA64427.1| (L29077) ubiquitin conjugating enzyme [Pisum sativum]
Length = 148
Score = 132 bits (332), Expect = 4e-30
Identities = 57/134 (42%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIVGPADSPYAGGVFLVTIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ ++ +YE
Sbjct: 122 EIAHMYKTDRTKYE 135
>gi|9989034|gb|AAG10797.1|AC022284_2 (AC022284) Ubiquitin-conjugating enzyme [Leishmania major]
gi|11022580|emb|CAC14238.1| (AL445678) probable ubiquitin-conjugating enzyme e2-17 kda
[Leishmania major]
Length = 148
Score = 132 bits (332), Expect = 4e-30
Identities = 59/144 (40%), Positives = 92/144 (62%), Gaps = 1/144 (0%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAP-SENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEY 243
A RR+ ++ K L++DPPA SG P SE+++ W A I GPE +P+ G F L + F +Y
Sbjct: 2 ALRRIQKELKDLEKDPPANTSGGPVSESDLFNWKATIIGPEDSPYAGGLFFLNIHFPSDY 61
Query: 244 PNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPAN 423
P KPP ++F +K++HPN+ +G ICLDIL+++WSP +S +L S+ SLL +PNP+ P
Sbjct: 62 PFKPPKLQFTTKIYHPNINNNGGICLDILKDQWSPALTISKVLLSVCSLLTDPNPDDPLV 121
Query: 424 SQAAQLYQENKREYEKRVSAIVEQ 495
A+ Y+ ++ + K + Q
Sbjct: 122 PDIARQYKTDRNAFNKTAAEWTRQ 145
>gi|464981|sp|P35135|UBC4_LYCES UBIQUITIN-CONJUGATING ENZYME E2-17 KD (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN)
gi|388207|gb|AAA34125.1| (L23762) ubiquitin carrier protein [Lycopersicon esculentum]
Length = 148
Score = 132 bits (332), Expect = 4e-30
Identities = 57/134 (42%), Positives = 87/134 (64%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + + F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYE 468
+ A +Y+ ++ +YE
Sbjct: 122 EIAHMYKTDRAKYE 135
>gi|15241138|ref|NP_200426.1| ubiquitin-conjugating enzyme-like protein [Arabidopsis thaliana]
gi|9758635|dbj|BAB09297.1| (AB011476) ubiquitin-conjugating enzyme-like protein [Arabidopsis
thaliana]
Length = 148
Score = 132 bits (331), Expect = 5e-30
Identities = 60/145 (41%), Positives = 90/145 (61%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEYP 246
A +R+ ++ + LQ DPP S P+ +++ W A I GP +PF G F + + F +YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 247 NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 426
KPP V F +K++HPN+ ++GSICLDIL+ +WSP VS +L SI SLL +PNP+ P
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 427 QAAQLYQENKREYEKRVSAIVEQSW 501
+ A +Y+ ++ +YE QSW
Sbjct: 122 EIAHIYKTDRVKYES-----TAQSW 141
>gi|15231957|ref|NP_187482.1| putative ubiquitin-conjugating enzyme [Arabidopsis thaliana]
gi|12322741|gb|AAG51365.1|AC012562_26 (AC012562) putative ubiquitin-conjugating enzyme; 54405-55468
[Arabidopsis thaliana]
Length = 149
Score = 132 bits (331), Expect = 5e-30
Identities = 60/135 (44%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
Frame = +1
Query: 67 ARRRLMRDFKRLQEDPPAGVSGAP-SENNIMVWNAVIFGPEGTPFEDGTFKLIVEFTEEY 243
A +R+ R+ + +Q PPA S P +E +I W A I GP +P+ G F + ++F+ +Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 244 PNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPAN 423
P KPP V F +K++HPN+ + GSICLDIL+ +WSP S +L SI SLL +PNPN P
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLV 121
Query: 424 SQAAQLYQENKREYE 468
+ A LY+ +K +YE
Sbjct: 122 PEIAHLYKVDKSKYE 136
Database: nr
Posted date: Oct 28, 2001 1:00 AM
Number of letters in database: 251,575,206
Number of sequences in database: 791,492
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 374,155,335
Number of Sequences: 791492
Number of extensions: 8207050
Number of successful extensions: 29299
Number of sequences better than 10.0: 521
Number of HSP's better than 10.0 without gapping: 28016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29062
length of database: 251,575,206
effective HSP length: 118
effective length of database: 158,179,150
effective search space used: 25150484850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1008002525-3896-23254
Query= B2B6#4 T7 Dec 06 01 (237 letters)
Database: nr 812,137 sequences; 258,228,741 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST
FAQs
Score E
Sequences producing significant alignments: (bits) Value
gi|2465175|dbj|BAA22570.1| (AB006786) activin beta B [Pagru... 173 4e-43
gi|10998150|dbj|BAB16971.1| (D88462) mature peptide [Oncorh... 173 4e-43
gi|5821398|dbj|BAA83804.1| (AB025356) activin B [Anguilla j... 167 2e-41
gi|4867811|emb|CAB43092.1| (AJ238981) activin beta B protei... 167 2e-41
gi|2118540|pir||I50103 activin beta B - zebra fish >gi|5163... 167 2e-41
gi|11079175|dbj|BAB17597.1| (AB009404) inhibin/activin [Cyp... 167 2e-41
gi|11079179|dbj|BAB17599.1| (AB009406) inhibin/activin [Cyp... 166 5e-41
gi|2209351|gb|AAB61468.1| (AF004669) activin beta B subunit... 166 6e-41
gi|484961|pir||PN0505 activin beta B-1 chain - goldfish (fr... 166 6e-41
gi|347721|gb|AAA49160.1| (L15340) activin beta-B-1 subunit ... 166 6e-41
gi|11079177|dbj|BAB17598.1| (AB009405) inhibin/activin [Cyp... 165 1e-40
gi|484962|pir||PN0506 activin beta B-2 chain - goldfish (fr... 164 1e-40
gi|347723|gb|AAA49161.1| (L15341) activin beta-B-2 subunit ... 164 1e-40
gi|2507452|sp|P27093|IHBB_CHICK INHIBIN BETA B CHAIN PRECUR... 164 2e-40
gi|3064062|gb|AAC14187.1| (AF055478) inhibin/activin beta B... 164 2e-40
gi|1502291|dbj|BAA12694.1| (D84517) activin beta-B subunit ... 164 2e-40
gi|186417|gb|AAA59169.1| (M13437) beta-B inhibin propeptide... 162 5e-40
gi|2118541|pir||I51199 activin beta B subunit - African cla... 162 5e-40
gi|186423|gb|AAA59170.1| (M31682) inhibin beta-B-subunit pr... 162 5e-40
gi|9257225|ref|NP_002184.1| (NM_002193) inhibin beta B subu... 162 5e-40
gi|14728340|ref|XP_046786.1| (XM_046786) inhibin beta B sub... 162 5e-40
gi|104118|pir||B36192 inhibin beta-B1 chain - African clawe... 162 5e-40
gi|104119|pir||C36192 inhibin beta-B2 chain - African clawe... 162 5e-40
gi|14728347|ref|XP_010807.3| (XM_010807) hypothetical prote... 162 5e-40
gi|1170523|sp|P42917|IHBB_BOVIN INHIBIN BETA B CHAIN PRECUR... 162 5e-40
gi|227545|prf||1706327A inhibin/activin betaB [Ovis aries] 162 5e-40
gi|3435092|gb|AAC32311.1| (AF013105) activin-b [Sparus aurata] 161 1e-39
gi|124284|sp|P04088|IHBB_PIG INHIBIN BETA B CHAIN PRECURSOR... 160 2e-39
gi|224796|prf||1201278C inhibin betaB precursor [Sus scrofa... 160 2e-39
gi|7438529|pir||B41398 inhibin beta-B chain precursor - rat 160 3e-39
gi|2507453|sp|Q04999|IHBB_MOUSE INHIBIN BETA B CHAIN PRECUR... 160 3e-39
gi|111835|pir||C40905 inhibin beta-B chain precursor - rat ... 160 3e-39
gi|2118538|pir||I48266 inhibin beta-B-subunit - mouse (frag... 160 3e-39
gi|603572|emb|CAA58290.1| (X83376) activin bB-subunit [Mus ... 144 2e-34
gi|104734|pir||A36193 inhibin beta-B chain - chicken (fragm... 139 5e-33
gi|409583|gb|AAA03079.1| (M57408) activin beta-A chain [Gal... 139 5e-33
gi|13936306|gb|AAK40342.1| (AY029555) activin subunit A pre... 120 2e-27
gi|163197|gb|AAA97415.1| (M13274) inhibin B subunit [Bos ta... 120 3e-27
gi|13752440|gb|AAK38654.1| (AF350256) activin beta-A [Ailur... 120 3e-27
gi|1340143|emb|CAA40806.1| (X57579) unnamed protein product... 120 3e-27
gi|10441966|gb|AAG17260.1|AF218018_1 (AF218018) unknown [Ho... 120 3e-27
gi|4504699|ref|NP_002183.1| (NM_002192) inhibin beta A subu... 120 3e-27
gi|1170522|sp|P43032|IHBA_SHEEP INHIBIN BETA A CHAIN PRECUR... 120 3e-27
gi|1708435|sp|P07995|IHBA_BOVIN INHIBIN BETA A CHAIN PRECUR... 120 3e-27
gi|33929|emb|CAA28041.1| (X04447) inhibin B (116aa) [Homo s... 120 3e-27
gi|6680451|ref|NP_032406.1| (NM_008380) inhibin beta-A [Mus... 120 3e-27
gi|124280|sp|P03970|IHBA_PIG INHIBIN BETA A CHAIN PRECURSOR... 120 3e-27
gi|8393613|ref|NP_058824.1| (NM_017128) inhibin beta-A [Rat... 120 3e-27
gi|1708436|sp|P55102|IHBA_HORSE INHIBIN BETA A CHAIN PRECUR... 120 4e-27
gi|2118535|pir||JC4862 activin beta-A chain precursor - Jap... 119 5e-27
gi|104117|pir||A36192 inhibin beta-A chain - African clawed... 117 2e-26
gi|13384093|gb|AAK21265.1|AF336338_1 (AF336338) inhibin-bet... 117 2e-26
gi|1155283|gb|AAC59738.1| (U42377) inhibin/activin beta A-s... 117 2e-26
gi|111833|pir||B40905 inhibin beta-A chain precursor - rat 117 3e-26
gi|5739383|gb|AAD50448.1|AF169032_1 (AF169032) activin beta... 115 1e-25
gi|484960|pir||PN0504 activin beta A chain - goldfish (frag... 115 1e-25
gi|347725|gb|AAA49162.1| (L15339) activin beta-A subunit [C... 115 1e-25
gi|1170521|sp|P27092|IHBA_CHICK INHIBIN BETA A CHAIN PRECUR... 114 2e-25
gi|11079181|dbj|BAB17600.1| (AB009407) inhibin/activin [Ory... 112 6e-25
gi|11079173|dbj|BAB17596.1| (AB009403) inhibin/activin [Cyp... 112 1e-24
gi|755740|emb|CAA51163.1| (X72498) mature inhibin [Homo sap... 109 7e-24
gi|11079183|dbj|BAB17601.1| (AB009408) inhibin/activin [Ory... 107 2e-23
gi|10998154|dbj|BAB16973.1| (D88464) mature peptide [Oncorh... 103 3e-22
gi|4867809|emb|CAB43091.1| (AJ238980) activin beta A protei... 103 5e-22
gi|1085213|pir||JC4151 activin beta D chain precursor - Afr... 94 2e-19
gi|6754354|ref|NP_034695.1| (NM_010565) inhibin beta-C [Mus... 89 9e-18
gi|7438534|pir||JC5366 activin beta C - mouse >gi|1150506|e... 89 9e-18
gi|12018292|ref|NP_072136.1| (NM_022614) activin/inhibin be... 87 5e-17
gi|5031795|ref|NP_005529.1| (NM_005538) inhibin beta C chai... 87 5e-17
gi|10998152|dbj|BAB16972.1| (D88463) mature peptide [Oncorh... 86 8e-17
gi|13899338|ref|NP_113667.1| (NM_031479) hypothetical prote... 84 2e-16
gi|6680453|ref|NP_032408.1| (NM_008382) inhibin beta E [Mus... 83 5e-16
gi|13929160|ref|NP_114003.1| (NM_031815) activin beta E [Ra... 83 5e-16
gi|14714539|gb|AAH10404.1|AAH10404 (BC010404) inhibin beta ... 83 5e-16
gi|4809189|gb|AAD30133.1|AF140032_1 (AF140032) activin beta... 83 5e-16
gi|7438533|pir||PW0042 activin - fruit fly (Drosophila sp.)... 78 2e-14
gi|10728140|gb|AAF59386.2| (AE003846) activin-beta gene pro... 78 2e-14
gi|763044|gb|AAA81169.1| (U23785) transforming growth facto... 72 2e-12
gi|544196|sp|P35621|DVR1_BRARE DVR-1 PROTEIN PRECURSOR >gi|... 70 6e-12
gi|14717125|emb|CAC44178.1| (AJ315160) bone morphogenetic p... 69 1e-11
gi|14210224|gb|AAK56941.1|AF374725_1 (AF374725) decapentapl... 69 1e-11
gi|6679977|ref|NP_032133.1| (NM_008107) growth differentiat... 66 7e-11
gi|109860|pir||A39364 GDF-1 embryonic growth factor - mouse... 66 7e-11
gi|399124|sp|P30884|BMPB_XENLA BONE MORPHOGENETIC PROTEIN 2... 66 9e-11
gi|115070|sp|P25703|BMPA_XENLA BONE MORPHOGENETIC PROTEIN 2... 66 9e-11
gi|103993|pir||JH0687 bone morphogenetic protein 2I precurs... 66 9e-11
gi|386519|gb|AAB27335.1| bone morphogenetic protein-2, xBMP... 66 9e-11
gi|3913455|sp|P91706|DECA_DROSI DECAPENTAPLEGIC PROTEIN PRE... 65 1e-10
gi|1695725|dbj|BAA13959.1| (D89444) Vg-1 [Cynops pyrrhogaster] 65 1e-10
gi|17137468|ref|NP_477311.1| (NM_057963) dpp-P1; Haplo-insu... 65 1e-10
gi|118409|sp|P07713|DECA_DROME DECAPENTAPLEGIC PROTEIN PREC... 65 1e-10
gi|1698634|gb|AAC47552.1| (U63857) decapentaplegic protein ... 65 1e-10
gi|2739356|gb|AAB94786.1| (AC003972) GDF-1 [Homo sapiens] 65 1e-10
gi|10880991|ref|NP_001483.2| (NM_001492) growth differentia... 65 1e-10
gi|1658384|gb|AAC60038.1| (U73003) orthologue of the Xenopu... 65 1e-10
gi|1335980|gb|AAB01194.1| (U55871) growth factor CVg1 [Gall... 65 1e-10
gi|11514752|pdb|1ES7|A Chain A, Complex Between Bmp-2 And T... 65 1e-10
gi|3023389|sp|O19006|BMP2_DAMDA BONE MORPHOGENETIC PROTEIN ... 65 1e-10
gi|4557369|ref|NP_001191.1| (NM_001200) bone morphogenetic ... 65 1e-10
gi|8392990|ref|NP_058874.1| (NM_017178) bone morphogenetic ... 65 1e-10
>gi|2465175|dbj|BAA22570.1| (AB006786) activin beta B [Pagrus major]
Length = 119
Score = 173 bits (438), Expect = 4e-43
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK
Sbjct: 39 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 98
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 99 LSTMSMLYFDDEYNIVKR 116
>gi|10998150|dbj|BAB16971.1| (D88462) mature peptide [Oncorhynchus mykiss]
Length = 102
Score = 173 bits (438), Expect = 4e-43
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK
Sbjct: 20 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 79
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 80 LSTMSMLYFDDEYNIVKR 97
>gi|5821398|dbj|BAA83804.1| (AB025356) activin B [Anguilla japonica]
Length = 395
Score = 167 bits (424), Expect = 2e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAPSGYFGNYCEG+CPAYMAGVP SASSFHTAVVNQYRMRGMSPGSMNSCCIPT+
Sbjct: 305 WNDWIIAPSGYFGNYCEGSCPAYMAGVPSSASSFHTAVVNQYRMRGMSPGSMNSCCIPTR 364
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 365 LSTMSMLYFDDEYNIVKR 382
>gi|4867811|emb|CAB43092.1| (AJ238981) activin beta B protein [Danio rerio]
Length = 138
Score = 167 bits (423), Expect = 2e-41
Identities = 74/78 (94%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAYMAGVPGSASSFHTAVVNQYRMRGMSPGS+NSCCIPTK
Sbjct: 43 WNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSVNSCCIPTK 102
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 103 LSTMSMLYFDDEYNIVKR 120
>gi|2118540|pir||I50103 activin beta B - zebra fish
gi|516357|emb|CAA53636.1| (X76051) activin beta B [Danio rerio]
Length = 393
Score = 167 bits (423), Expect = 2e-41
Identities = 74/78 (94%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAYMAGVPGSASSFHTAVVNQYRMRGMSPGS+NSCCIPTK
Sbjct: 303 WNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSVNSCCIPTK 362
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 363 LSTMSMLYFDDEYNIVKR 380
>gi|11079175|dbj|BAB17597.1| (AB009404) inhibin/activin [Cyprinus carpio]
gi|11079185|dbj|BAB17602.1| (AB009409) inhibin/activin [Oryzias latipes]
Length = 115
Score = 167 bits (423), Expect = 2e-41
Identities = 74/78 (94%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAYMAGVPGSASSFHTAVVNQYRMRGMSPGS+NSCCIPTK
Sbjct: 26 WNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSVNSCCIPTK 85
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 86 LSTMSMLYFDDEYNIVKR 103
>gi|11079179|dbj|BAB17599.1| (AB009406) inhibin/activin [Cyprinus carpio]
Length = 115
Score = 166 bits (420), Expect = 5e-41
Identities = 73/78 (93%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRGMSPGS+NSCCIPTK
Sbjct: 26 WNDWIIAPAGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGMSPGSVNSCCIPTK 85
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 86 LSTMSMLYFDDEYNIVKR 103
>gi|2209351|gb|AAB61468.1| (AF004669) activin beta B subunit precursor [Carassius auratus]
Length = 392
Score = 166 bits (419), Expect = 6e-41
Identities = 73/78 (93%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAYMAGVPGSASSFHTAVVNQYRMRG+SPGS+NSCCIPTK
Sbjct: 302 WNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASSFHTAVVNQYRMRGISPGSVNSCCIPTK 361
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 362 LSTMSMLYFDDEYNIVKR 379
>gi|484961|pir||PN0505 activin beta B-1 chain - goldfish (fragment)
Length = 115
Score = 166 bits (419), Expect = 6e-41
Identities = 73/78 (93%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAYMAGVPGSASSFHTAVVNQYRMRG+SPGS+NSCCIPTK
Sbjct: 26 WNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASSFHTAVVNQYRMRGISPGSVNSCCIPTK 85
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 86 LSTMSMLYFDDEYNIVKR 103
>gi|347721|gb|AAA49160.1| (L15340) activin beta-B-1 subunit [Carassius auratus]
Length = 102
Score = 166 bits (419), Expect = 6e-41
Identities = 73/78 (93%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAYMAGVPGSASSFHTAVVNQYRMRG+SPGS+NSCCIPTK
Sbjct: 20 WNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASSFHTAVVNQYRMRGISPGSVNSCCIPTK 79
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 80 LSTMSMLYFDDEYNIVKR 97
>gi|11079177|dbj|BAB17598.1| (AB009405) inhibin/activin [Cyprinus carpio]
Length = 115
Score = 165 bits (417), Expect = 1e-40
Identities = 73/78 (93%), Positives = 77/78 (98%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAYMAGVPGSAS FHTAVVNQYRMRGMSPGS+NSCCIPTK
Sbjct: 26 WNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASLFHTAVVNQYRMRGMSPGSVNSCCIPTK 85
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 86 LSTMSMLYFDDEYNIVKR 103
>gi|484962|pir||PN0506 activin beta B-2 chain - goldfish (fragment)
Length = 115
Score = 164 bits (416), Expect = 1e-40
Identities = 72/78 (92%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPA++AGVPGSASSFHTAVVNQYRMRGMSPGS+NSCCIPTK
Sbjct: 26 WNDWIIAPAGYYGNYCEGSCPAFLAGVPGSASSFHTAVVNQYRMRGMSPGSVNSCCIPTK 85
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 86 LSTMSMLYFDDEYNIVKR 103
>gi|347723|gb|AAA49161.1| (L15341) activin beta-B-2 subunit [Carassius auratus]
Length = 102
Score = 164 bits (416), Expect = 1e-40
Identities = 72/78 (92%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPA++AGVPGSASSFHTAVVNQYRMRGMSPGS+NSCCIPTK
Sbjct: 20 WNDWIIAPAGYYGNYCEGSCPAFLAGVPGSASSFHTAVVNQYRMRGMSPGSVNSCCIPTK 79
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 80 LSTMSMLYFDDEYNIVKR 97
>gi|2507452|sp|P27093|IHBB_CHICK INHIBIN BETA B CHAIN PRECURSOR (ACTIVIN BETA-B CHAIN)
gi|1429377|emb|CAA96248.1| (Z71594) activin beta B [Gallus gallus]
Length = 391
Score = 164 bits (414), Expect = 2e-40
Identities = 71/78 (91%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAPSGY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 301 WNDWIIAPSGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 360
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 361 LSTMSMLYFDDEYNIVKR 378
>gi|3064062|gb|AAC14187.1| (AF055478) inhibin/activin beta B subunit precursor [Gallus gallus]
Length = 392
Score = 164 bits (414), Expect = 2e-40
Identities = 71/78 (91%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAPSGY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 302 WNDWIIAPSGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 361
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 362 LSTMSMLYFDDEYNIVKR 379
>gi|1502291|dbj|BAA12694.1| (D84517) activin beta-B subunit [Cynops pyrrhogaster]
Length = 104
Score = 164 bits (414), Expect = 2e-40
Identities = 71/78 (91%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GYFGNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 20 WNDWIIAPAGYFGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 79
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 80 LSTMSMLYFDDEYNIVKR 97
>gi|186417|gb|AAA59169.1| (M13437) beta-B inhibin propeptide [Homo sapiens]
Length = 353
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 263 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 322
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 323 LSTMSMLYFDDEYNIVKR 340
>gi|2118541|pir||I51199 activin beta B subunit - African clawed frog
gi|386028|gb|AAB26863.1| (S61773) activin beta B subunit [Xenopus laevis]
Length = 370
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 280 WNDWIIAPAGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 339
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 340 LSTMSMLYFDDEYNIVKR 357
>gi|186423|gb|AAA59170.1| (M31682) inhibin beta-B-subunit precursor [Homo sapiens]
Length = 386
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 296 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 355
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 356 LSTMSMLYFDDEYNIVKR 373
>gi|9257225|ref|NP_002184.1| (NM_002193) inhibin beta B subunit precursor; Inhibin, beta-2;
activin AB beta polypeptide precursor [Homo sapiens]
Length = 407
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 317 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 376
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 377 LSTMSMLYFDDEYNIVKR 394
>gi|14728340|ref|XP_046786.1| (XM_046786) inhibin beta B subunit precursor [Homo sapiens]
gi|1708437|sp|P09529|IHBB_HUMAN INHIBIN BETA B CHAIN PRECURSOR (ACTIVIN BETA-B CHAIN)
gi|106726|pir||A40150 inhibin beta-B chain precursor - human
gi|386827|gb|AAA59451.1| (M31669) inhibin beta-B-subunit precursor [Homo sapiens]
gi|226851|prf||1608260C inhibin betaB [Homo sapiens]
Length = 407
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 317 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 376
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 377 LSTMSMLYFDDEYNIVKR 394
>gi|104118|pir||B36192 inhibin beta-B1 chain - African clawed frog (fragment)
Length = 101
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 19 WNDWIIAPAGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 78
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 79 LSTMSMLYFDDEYNIVKR 96
>gi|104119|pir||C36192 inhibin beta-B2 chain - African clawed frog (fragment)
Length = 101
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 19 WNDWIIAPAGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 78
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 79 LSTMSMLYFDDEYNIVKR 96
>gi|14728347|ref|XP_010807.3| (XM_010807) hypothetical protein XP_010807 [Homo sapiens]
gi|14728353|ref|XP_046785.1| (XM_046785) hypothetical protein XP_046785 [Homo sapiens]
Length = 320
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 230 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 289
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 290 LSTMSMLYFDDEYNIVKR 307
>gi|1170523|sp|P42917|IHBB_BOVIN INHIBIN BETA B CHAIN PRECURSOR (ACTIVIN BETA-B CHAIN)
gi|1083004|pir||S50899 betaB inhibin precursor - bovine
gi|563753|gb|AAB60628.1| (U16241) betaB inhibin/activin precursor [Bos taurus]
Length = 408
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 318 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 377
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 378 LSTMSMLYFDDEYNIVKR 395
>gi|227545|prf||1706327A inhibin/activin betaB [Ovis aries]
Length = 408
Score = 162 bits (411), Expect = 5e-40
Identities = 70/78 (89%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 318 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 377
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 378 LSTMSMLYFDDEYNIVKR 395
>gi|3435092|gb|AAC32311.1| (AF013105) activin-b [Sparus aurata]
Length = 81
Score = 161 bits (407), Expect = 1e-39
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK
Sbjct: 10 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 69
Query: 55 LSTMSMLYFDDE 20
LSTMSMLYFDDE
Sbjct: 70 LSTMSMLYFDDE 81
>gi|124284|sp|P04088|IHBB_PIG INHIBIN BETA B CHAIN PRECURSOR (ACTIVIN BETA-B CHAIN)
gi|69045|pir||WFPGBB inhibin beta-B chain precursor - pig (fragment)
gi|2006|emb|CAA27021.1| (X03267) inhibin beta-(b) subunit precursor [Sus scrofa]
Length = 349
Score = 160 bits (406), Expect = 2e-39
Identities = 69/78 (88%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
W+DWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 259 WSDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 318
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 319 LSTMSMLYFDDEYNIVKR 336
>gi|224796|prf||1201278C inhibin betaB precursor [Sus scrofa domestica]
Length = 349
Score = 160 bits (406), Expect = 2e-39
Identities = 69/78 (88%), Positives = 78/78 (99%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
W+DWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTK
Sbjct: 259 WSDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTK 318
Query: 55 LSTMSMLYFDDEYNIVKR 2
LSTMSMLYFDDEYNIVKR
Sbjct: 319 LSTMSMLYFDDEYNIVKR 336
>gi|7438529|pir||B41398 inhibin beta-B chain precursor - rat
Length = 411
Score = 160 bits (405), Expect = 3e-39
Identities = 69/78 (88%), Positives = 77/78 (98%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG +NSCCIPTK
Sbjct: 321 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGPVNSCCIPTK 380
Query: 55 LSTMSMLYFDDEYNIVKR 2
LS+MSMLYFDDEYNIVKR
Sbjct: 381 LSSMSMLYFDDEYNIVKR 398
>gi|2507453|sp|Q04999|IHBB_MOUSE INHIBIN BETA B CHAIN PRECURSOR (ACTIVIN BETA-B CHAIN)
gi|7438530|pir||I48235 inhibin beta-B chain - mouse (fragment)
Length = 255
Score = 160 bits (405), Expect = 3e-39
Identities = 69/78 (88%), Positives = 77/78 (98%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG +NSCCIPTK
Sbjct: 165 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGPVNSCCIPTK 224
Query: 55 LSTMSMLYFDDEYNIVKR 2
LS+MSMLYFDDEYNIVKR
Sbjct: 225 LSSMSMLYFDDEYNIVKR 242
>gi|111835|pir||C40905 inhibin beta-B chain precursor - rat (fragment)
Length = 279
Score = 160 bits (405), Expect = 3e-39
Identities = 69/78 (88%), Positives = 77/78 (98%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG +NSCCIPTK
Sbjct: 189 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGPVNSCCIPTK 248
Query: 55 LSTMSMLYFDDEYNIVKR 2
LS+MSMLYFDDEYNIVKR
Sbjct: 249 LSSMSMLYFDDEYNIVKR 266
>gi|2118538|pir||I48266 inhibin beta-B-subunit - mouse (fragment)
gi|50148|emb|CAA49326.1| (X69620) inhibin beta-B-subunit [Mus musculus]
Length = 122
Score = 160 bits (405), Expect = 3e-39
Identities = 69/78 (88%), Positives = 77/78 (98%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG +NSCCIPTK
Sbjct: 32 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGPVNSCCIPTK 91
Query: 55 LSTMSMLYFDDEYNIVKR 2
LS+MSMLYFDDEYNIVKR
Sbjct: 92 LSSMSMLYFDDEYNIVKR 109
>gi|603572|emb|CAA58290.1| (X83376) activin bB-subunit [Mus musculus]
Length = 234
Score = 144 bits (363), Expect = 2e-34
Identities = 61/70 (87%), Positives = 69/70 (98%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTK 56
WNDWIIAP+GY+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG +NSCCIPTK
Sbjct: 165 WNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGPVNSCCIPTK 224
Query: 55 LSTMSMLYFD 26
LS+MSMLYFD
Sbjct: 225 LSSMSMLYFD 234
>gi|104734|pir||A36193 inhibin beta-B chain - chicken (fragment)
Length = 72
Score = 139 bits (351), Expect = 5e-33
Identities = 61/68 (89%), Positives = 68/68 (99%)
Frame = -3
Query: 205 YFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTKLSTMSMLYFD 26
Y+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTKLSTMSMLYFD
Sbjct: 1 YYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFD 60
Query: 25 DEYNIVKR 2
DEYNIVKR
Sbjct: 61 DEYNIVKR 68
>gi|409583|gb|AAA03079.1| (M57408) activin beta-A chain [Gallus gallus]
gi|555420|gb|AAA48568.1| (M61166) activin beta-A subunit [Gallus gallus]
Length = 71
Score = 139 bits (351), Expect = 5e-33
Identities = 61/68 (89%), Positives = 68/68 (99%)
Frame = -3
Query: 205 YFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTKLSTMSMLYFD 26
Y+GNYCEG+CPAY+AGVPGSASSFHTAVVNQYRMRG++PG++NSCCIPTKLSTMSMLYFD
Sbjct: 1 YYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFD 60
Query: 25 DEYNIVKR 2
DEYNIVKR
Sbjct: 61 DEYNIVKR 68
>gi|13936306|gb|AAK40342.1| (AY029555) activin subunit A precursor [Ailurus fulgens]
Length = 119
Score = 120 bits (302), Expect = 2e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 27 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGRSPFANLKSCCVPT 86
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 87 KLRPMSMLYYDDGQNIIKK 105
>gi|163197|gb|AAA97415.1| (M13274) inhibin B subunit [Bos taurus]
Length = 168
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 77 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 136
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 137 KLRPMSMLYYDDGQNIIKK 155
>gi|13752440|gb|AAK38654.1| (AF350256) activin beta-A [Ailuropoda melanoleuca]
gi|13936304|gb|AAK40341.1| (AY029554) activin subunit A precursor [Helarctos malayanus]
Length = 119
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 27 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 86
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 87 KLRPMSMLYYDDGQNIIKK 105
>gi|1340143|emb|CAA40806.1| (X57579) unnamed protein product [Homo sapiens]
Length = 297
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 206 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 265
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 266 KLRPMSMLYYDDGQNIIKK 284
>gi|10441966|gb|AAG17260.1|AF218018_1 (AF218018) unknown [Homo sapiens]
Length = 426
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 335 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 394
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 395 KLRPMSMLYYDDGQNIIKK 413
>gi|4504699|ref|NP_002183.1| (NM_002192) inhibin beta A subunit precursor; Inhibin, beta-1; EDF
[Homo sapiens]
gi|14748705|ref|XP_042996.1| (XM_042996) inhibin beta A subunit precursor [Homo sapiens]
gi|14748714|ref|XP_042997.1| (XM_042997) hypothetical protein XP_042997 [Homo sapiens]
gi|14748721|ref|XP_042995.1| (XM_042995) hypothetical protein XP_042995 [Homo sapiens]
gi|124279|sp|P08476|IHBA_HUMAN Inhibin beta A chain precursor (Activin beta-A chain) (Erythroid
differentiation protein) (EDF)
gi|87936|pir||B24248 inhibin beta-A chain precursor - human
gi|181947|gb|AAA35787.1| (J03634) erythroid differentiation protein precursor [Homo sapiens]
gi|307069|gb|AAA59168.1| (M13436) beta-A inhibin [Homo sapiens]
gi|825621|emb|CAA40805.1| (X57578) activin beta-A subunit [Homo sapiens]
gi|5441939|gb|AAD43185.1|AC005027_1 (AC005027) inhibin beta-A chain precursor [Homo sapiens]
gi|14043815|gb|AAH07858.1|AAH07858 (BC007858) inhibin, beta A (activin A, activin AB alpha
polypeptide) [Homo sapiens]
gi|226850|prf||1608260B inhibin betaA [Homo sapiens]
Length = 426
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 335 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 394
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 395 KLRPMSMLYYDDGQNIIKK 413
>gi|1170522|sp|P43032|IHBA_SHEEP INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN)
gi|2118536|pir||I47072 inhibin beta-A chain precursor - sheep
gi|310380|gb|AAC41621.1| (L19218) inhibin beta-A-subunit [Ovis aries]
Length = 425
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 334 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 393
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 394 KLRPMSMLYYDDGQNIIKK 412
>gi|1708435|sp|P07995|IHBA_BOVIN INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN)
gi|1083003|pir||S50898 inhibin beta-A chain precursor - bovine
gi|563749|gb|AAB60627.1| (U16239) betaA inhibin/activin precursor [Bos taurus]
Length = 425
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 334 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 393
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 394 KLRPMSMLYYDDGQNIIKK 412
>gi|33929|emb|CAA28041.1| (X04447) inhibin B (116aa) [Homo sapiens]
Length = 116
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 25 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 84
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 85 KLRPMSMLYYDDGQNIIKK 103
>gi|6680451|ref|NP_032406.1| (NM_008380) inhibin beta-A [Mus musculus]
gi|462406|sp|Q04998|IHBA_MOUSE INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN)
gi|346869|pir||S31440 inhibin beta-A chain - mouse
gi|50146|emb|CAA49325.1| (X69619) inhibin beta-A-subunit [Mus musculus]
Length = 424
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 333 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 392
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 393 KLRPMSMLYYDDGQNIIKK 411
>gi|124280|sp|P03970|IHBA_PIG INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN)
gi|69044|pir||WFPGBA inhibin beta-A chain precursor - pig
gi|2003|emb|CAA27020.1| (X03266) inhibin beta-(a) subunit precursor (aa 1-424) [Sus scrofa]
gi|224795|prf||1201278B inhibin betaA precursor [Sus scrofa domestica]
Length = 424
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 333 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 392
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 393 KLRPMSMLYYDDGQNIIKK 411
>gi|8393613|ref|NP_058824.1| (NM_017128) inhibin beta-A [Rattus norvegicus]
gi|124281|sp|P18331|IHBA_RAT INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN)
gi|204937|gb|AAA41436.1| (M37482) inhibin beta-A-subunit precursor [Rattus norvegicus]
Length = 424
Score = 120 bits (301), Expect = 3e-27
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+N YRMRG SP ++ SCC+PT
Sbjct: 333 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPT 392
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 393 KLRPMSMLYYDDGQNIIKK 411
>gi|1708436|sp|P55102|IHBA_HORSE INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN)
gi|786171|dbj|BAA08862.1| (D50326) inhibin beta A subunit [Equus caballus]
Length = 426
Score = 120 bits (300), Expect = 4e-27
Identities = 50/79 (63%), Positives = 64/79 (80%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
WNDWIIAPSGY NYCEG CP+++AG GS+ SFH+ V+NQYR+RG +P ++ SCC+PT
Sbjct: 335 WNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINQYRLRGHNPFANLKSCCVPT 394
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 395 KLRPMSMLYYDDGQNIIKK 413
>gi|2118535|pir||JC4862 activin beta-A chain precursor - Japanese common newt
gi|1502289|dbj|BAA12693.1| (D84516) activin beta-A subunit [Cynops pyrrhogaster]
Length = 413
Score = 119 bits (299), Expect = 5e-27
Identities = 51/79 (64%), Positives = 61/79 (76%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 WNDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSP-GSMNSCCIPT 59
W+DW+IAP GY NYCEG+CP Y+ G GS SFH AV+NQYRMRG SP S+ SCC+PT
Sbjct: 322 WSDWVIAPPGYTANYCEGDCPMYITGTSGSGPSFHAAVINQYRMRGYSPFTSVKSCCVPT 381
Query: 58 KLSTMSMLYFDDEYNIVKR 2
KL MSMLY+DD NI+K+
Sbjct: 382 KLRAMSMLYYDDGQNIIKK 400
Database: nr
Posted date: Dec 7, 2001 11:20 PM
Number of letters in database: 258,228,741
Number of sequences in database: 812,137
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,973,553
Number of Sequences: 812137
Number of extensions: 1023875
Number of successful extensions: 3823
Number of sequences better than 10.0: 549
Number of HSP's better than 10.0 without gapping: 3369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3516
length of database: 258,228,741
effective HSP length: 54
effective length of database: 214,373,343
effective search space used: 5144960232
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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Intrafollicular action of estrogen in regulating pituitary-induced ovarian progesterone synthesis and oocyte maturation in Rana pipiens: temporal relationship and locus of action. Gen Comp Endocrinol 1985 Jun;58(3):421-35 PMID: 3874115, UI: 85231984
In vitro estrogen modulation of pituitary and progesterone-induced oocyte maturation in Rana pipiens. J Exp Zool 1983 May;226(2):281-91 PMID: 6602863, UI: 83240493
Relative roles of theca and granulosa cells in ovarian follicular steroidogenesis in
the amphibian, Rana nigromaculata.
Gen Comp Endocrinol. 1994 May;94(2):207-14.
PMID:
7926630; UI: 95011437.
Changes in the activities of steroidogenic enzymes during the development of ovarian
follicles in Rana nigromaculata.
Gen Comp Endocrinol. 1993 Nov;92(2):225-32.
PMID:
8282172; UI: 94109657.
Evidence for follicle wall involvement in ovulation and progesterone production by frog
(Rana pipiens) follicles in vitro.
Differentiation. 1982;22(2):79-84.
PMID:
6982185; UI: 83028280
Cholesterol mediation of progesterone production and oocyte
maturation in cultured amphibian (Rana pipiens) ovarian follicles.
Biol Reprod. 1987 Jun;36(5):1219-28.
PMID:
3497671; UI: 87299916
Protein synthesis and steroidogenesis in amphibian (Rana pipiens) ovarian
follicles: studies on the conversion of pregnenolone to progesterone.
Gen Comp Endocrinol. 1986 Sep;63(3):441-50.
PMID:
3493948; UI: 87163357
Role of follicle wall in meiosis reinitiation induced by insulin in Rana pipiens
oocytes.
Am J Physiol. 1981 Jul;241(1):E51-6.
PMID:
7018265; UI: 81229865
Stimulatory and inhibitory effects of human follicular fluid on amphibian oocyte
maturation and ovulation in vitro.
Differentiation. 1982;21(1):41-4.
PMID:
6978271; UI: 82165456.
Spontaneous maturation of follicular oocytes in Rana dybowskii in vitro:
seasonal influences, progesterone production and involvement of cAMP.
J Exp Zool. 1989 Nov;252(2):190-9.
PMID:
2557374; UI: 90095381.
Role of protein kinase C activation in oocyte maturation and steroidogenesis in ovarian
follicles of Rana pipiens: studies with phorbol 12-myristate 13-acetate.
Gamete Res. 1988 Nov;21(3):323-34.
PMID:
2854534; UI: 89232981.
Relation between acute pituitary responsiveness to gonadotropin releasing hormone
(GnRH) and the ovarian cycle in the bullfrog, Rana catesbeiana.
Gen Comp Endocrinol. 1983 Jul;51(1):148-53.
PMID:
6411518; UI: 83288482.
Role of cAMP in modulating intrafollicular progesterone levels and oocyte maturation in
amphibians (Rana pipiens).
Dev Biol. 1986 Oct;117(2):354-64.
PMID:
2428681; UI: 87005562.
Germinal vesicle migration and dissolution in Rana
pipiens oocytes: effect of steroids and microtubule poisons.
Cell Differ. 1987 Apr;20(4):239-51.
PMID:
2884043; UI: 87215953.
Spontaneous oocyte maturation in Rana pipiens: Estrogen and follicle wall involvement. Gamete Research. 1985;12:11-28. Lin, Y.-W. P. and A.W. Schuetz.
Studies on the mechanism of action of estradiol in regulating follicular progesterone levels: Effects on cAMP mediated events and 3beta-hydroxysteroid dehydrogenase. Devlop. Growth & Differ. 1988;30(6):611-618. Lin, Y.-W. P., H.B. Kwon, T.R. Petrino, and A.W. Schuetz.
Inhibitory action of the gonadopeptide Inhibin on amphibian (Rana pipiens) steroidogenesis and oocyte
maturation. J Exp Zool. 1999; 284(2)232-240. Lin, Y.-W. P., T. R. Petrino, A.M.
Landin, S. Franco, and I. Simeus. Abstract:PMID:
10404651, UI: 99332730
[See Related Articles] on Rana pipiens
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Permission to use zebrafish image given by Pat Edwards:http://zfish.uoregon.edu/
The Fish Net Zebrafish Research Databases (Univ. Oregon)
SEARCH the Fish Net website
Zebrafish Book A guide for the laboratory use of zebrafish Danio* (Brachydanio) rerio
ZFIN - the on-line database of zebrafish information
FishScope,
Confocal images and movies of early development from Mark Cooper at University of WashingtonEmbryonic and larval anatomy
ZEBRAFISH WEBSERVER (Zebrafish server at Harvard)
Report from the NIH Non-Mammalian Models Meeting, February 16, 1999 : Zebrafish Breakout Group Recommendations
Trans-NIH Zebrafish Coordinating Committee: Zebrafish Genomics Initiative
Zebrafish Earns Its Stripes in Genetic Screens- Science 288:1160-1161, 2000
Florida Academy of Sciences Presentations
(To start Slide Show, Click on the Titles below)
Role of Inhibins as an Intragonadal Modulator
Society for the Study of Reproduction Presentation
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Effect of the Gonadopeptide Inhibin on Fundulus heteroclitus Oocyte Maturation |
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